Sphingobacterium bambusae: SCB77_12820
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Entry
SCB77_12820 CDS
T09645
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00521
Streptomycin biosynthesis
sbam00523
Polyketide sugar unit biosynthesis
sbam00525
Acarbose and validamycin biosynthesis
sbam00541
Biosynthesis of various nucleotide sugars
sbam01100
Metabolic pathways
sbam01110
Biosynthesis of secondary metabolites
sbam01250
Biosynthesis of nucleotide sugars
Module
sbam_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SCB77_12820 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SCB77_12820 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
SCB77_12820 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SCB77_12820 (rfbB)
00525 Acarbose and validamycin biosynthesis
SCB77_12820 (rfbB)
Enzymes [BR:
sbam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SCB77_12820 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
NAD_binding_10
NmrA
KR
DXP_reductoisom
Motif
Other DBs
NCBI-ProteinID:
WPL46843
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All DBs
Position
3063801..3064853
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AA seq
350 aa
AA seq
DB search
MEKTICITGGAGFIGSHVVREFVKKYPHYRIINIDALTYAGNLENLRDIEQEPNYSFVKA
DITDAAHILSIFQEYQPDGVIHLAAESHVDRSITNPTAFVMTNVIGTVNLLNAAKEIWKD
NYEGKRFHHVSTDEVFGALGDTGLFTEDTKYDPHSPYSASKASSDHFVRAYHDTYGLPIV
LTNCSNNYGPNHFPEKLIPLCIHNILNEKPLPIYGDGKYTRDWLFVIDHAKAIDLVYHQG
KNGDSYNVGGFNEWQNIDLVKELCRQMDEKLGREEGTSAKLIAFVKDRPGHDLRYAIDAR
KINQELGYQPSVTFEQGLSITIDWFLNNEEWLNNVTSGDYQGYYEKQYKG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagaccatatgcattaccggaggtgctggatttatcggatcgcacgtcgttcgg
gagtttgtcaagaaatacccacactatcgtattatcaacattgacgcattgacctacgcg
ggcaatctcgagaatttgcgcgatatcgaacaggaacccaactattcctttgtcaaagca
gatattaccgatgcggcccatatcttgtccatctttcaggaataccaaccagacggggtg
atacatctcgcagccgaatcccatgttgaccgttccattaccaatcctacggccttcgtt
atgactaatgtaattggaacggttaacctgttgaatgcggcgaaagagatctggaaagac
aactatgaaggaaagcgctttcaccatgtttctactgacgaggtgtttggcgcattgggc
gataccggtctgtttaccgaagacaccaaatatgatccgcattcgccctattcggcatcg
aaggcttcgtcagatcattttgtgcgcgcctatcacgatacctacggtcttcctatcgta
ttgacaaattgttcgaacaattacgggccaaaccattttcctgaaaaacttattcctctt
tgtatacataatatcttaaacgagaagccccttccgatctacggagatggaaaatacacg
cgcgattggctgtttgtgatcgatcatgccaaggctatcgatttggtctatcatcaggga
aagaatggcgactcctataatgtaggtgggtttaatgaatggcaaaatattgaccttgta
aaggaattgtgccggcagatggatgagaagctggggcgcgaagagggtacatcggccaag
ttgattgcttttgttaaggatagacctggccatgatttgcgttacgcgattgatgctcgt
aagatcaatcaggagctcggttatcaaccttcggttacttttgagcagggcttgtcgatt
acaattgattggtttctgaataatgaagaatggttgaataatgtgacttcgggagattac
cagggttattatgaaaagcaatataaggggtaa
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