Sphingobacterium bambusae: SCB77_14625
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Entry
SCB77_14625 CDS
T09645
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCB77_14625 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbam01007
]
SCB77_14625 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbam03016
]
SCB77_14625 (hisS)
Enzymes [BR:
sbam01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SCB77_14625 (hisS)
Amino acid related enzymes [BR:
sbam01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SCB77_14625 (hisS)
Transfer RNA biogenesis [BR:
sbam03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SCB77_14625 (hisS)
Prokaryotic type
SCB77_14625 (hisS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2
tRNA-synt_2b
HGTP_anticodon2
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
WPL47198
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All DBs
Position
3540606..3541994
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AA seq
462 aa
AA seq
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MATIKPSLAKGTRDFSPLEMEKRNHIFNTLKAVFKKFGYNEIQTPSFENLSTLTGKYGEE
GDKLIFKILNSGDYLAKAPSDLLDSKNALKLIPHISEKALRYDLTVPFARYVVMHQHELA
LPFKRFQIQPVWRADRPQRGRYREFYQCDVDVVGSPSLLNEAEFILIYHEALLALGLTDF
TIKLNNRKILSGIAEVIGKPQLIVDMTVAIDKLDKIGLDGVNKELLERGFTAEDLDLLKP
IILLEGTNSQKLQALKTVLASSVVGLRGIEEIEEVFSYVEHFAAASLLDKVVEVDITLAR
GLNYYTGCIFEVKTNEVAMGSIGGGGRYDDLTGMFGLKDLTGVGVSFGADRIYDVLEELG
RFPSSAAATTQLLIVNFDKSIEPFTLRLLADLRAAGIAAELYPAAVKLKKQMGYADDKKI
PYVLLVGEEETTSGDLSLKDMQSGEQRKVRAEELIDILRNNG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgatcaaaccttccttggctaaaggaacacgcgatttttcccccttagagatg
gagaaacgcaatcatatatttaatacccttaaagctgtctttaaaaaatttggatacaat
gagatccaaacgccgtcattcgagaatctatctacattgaccggaaagtatggcgaggaa
ggtgataaattgattttcaagatactcaattctggcgattacctagcgaaagcgccatcc
gatttgttggacagcaagaatgcccttaaacttattccgcatatttcagagaaggctttg
cgctatgatttaacggtgccttttgcgcgctacgtcgtgatgcatcagcatgaattggca
ttgcctttcaaaagatttcaaattcaacctgtttggcgtgcagatcgtccgcagcgcggt
cgttatcgcgagttctaccagtgtgacgtagatgtcgtgggttctccttctttgctgaat
gaagcggaatttatcctgatctaccatgaagcgctattggcgctaggcttgacggatttt
acgatcaaactcaacaaccgaaaaatcttgagtggtatagccgaggttattggcaagccc
cagctgatcgtagacatgacagtggctattgacaagctggataagatcgggttggatggc
gtgaacaaagagctgctagagcgtggtttcacggcggaagatttagatctccttaaacct
attatcctgctggaaggtacaaatagccaaaaactgcaggccttgaaaacggtgctcgca
tcctccgttgtgggcttacgcggtatcgaggagatcgaagaagtgttttcctatgtcgag
cattttgctgcggcttccctattggataaagttgtcgaagttgatatcaccttggcccgt
ggcctaaactactacaccggttgtatctttgaggtgaagaccaatgaagtggcgatgggg
agcatcggcgggggaggtcgttacgatgatttgacagggatgttcggcttgaaagattta
acaggcgttggtgtgtcctttggcgcagatcgtatttacgacgtgctggaggagctggga
cgttttccttcatccgccgctgctacaacacaactgctgatcgtgaattttgacaaatcc
atcgagccctttacgcttcgtctgttagccgatctgcgtgccgcaggcatcgcagcggag
ctttatcctgccgccgtgaagctgaaaaagcagatgggctatgccgatgacaagaagatt
ccatatgtactactcgtcggtgaagaagaaaccacatccggcgacctttcattgaaggat
atgcaaagcggtgagcagcgcaaagtgcgcgccgaagagttgattgacatattgcgaaac
aacgggtaa
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