Sphingobacterium bambusae: SCB77_18490
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Entry
SCB77_18490 CDS
T09645
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sbam
Sphingobacterium bambusae
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbam02000
]
SCB77_18490
Transporters [BR:
sbam02000
]
Other transporters
Pores ion channels [TC:
1
]
SCB77_18490
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
Dockerin_1
Av_adeno_fibre
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
WPL47941
LinkDB
All DBs
Position
4450171..4453155
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AA seq
994 aa
AA seq
DB search
MKGFAFKTSVLGLSLLSTLGLATTVHAAIPRPSSSLRSAWQQEVRGIVRNENGEAMAGVT
VLVVGTTVGTSTGEDGSYRVLLPTGKTQLAFSILGYSSQTLQVTGTTLDVQLKPTGNELE
ELVVVGYGSTTKKDLTGAVNTVSSKDFNTGLVGSPEQLINGKTAGVQVMSNSGSPSAGSS
IRIRGGASLSASNDPLIVLDGVPLETGGISGNSGNFLSLINPNDIESMTVLKDASATAIY
GSRASNGVLLITTKKGKGDALRLSFSSIVSMQQALGVADMMSRDEFAELINSRGTAAQKA
LLGEASTDWLDQVFQQAIGTDNNLSLQGKIAKTLPFRASVGYYDQQGTLRTDRSERMTGS
LVLSPTFFDQHLSVNLNLKGARNNNRFANTDAIWSAIAFNPTQPIYSGLDTYGGYYESLD
NAGLPATGANLNPLGLLNQERHRSTVNRGIGNLDMDYKFHFLPELKAHVTLGYDYAKGNG
FNHIPASAANNFTIQGAYDRYAQTLENRLFTGYLNYNKSLPAIKSTVEVTAGHDYQYWSA
ERPPIVYLNDLGDVRSTAIASDERHALISWYGRLNYNFDSRYLLTATIRKDGTSRFSPEN
RWGTFPSLALAWRLSEESFLKDVSFLDDLKLRASYGVTGQQEGIGNYEYLPVYNLGTQYA
QYRFGDQYHLVYRPSVYNRDLRWETTKAFNYGVDFSLWQGRVSGSVEYYTRKTHDLLANV
PVAAGTNFDQNATINVGNVESSGLEFQLNTVPIQTDNLRWEVNVNATNQHIKVTNIALVQ
DANSVGTYVGPVVSGRGIQILTTGYQPYMFYVYKQLYDEGGKPLEGIYADLNGDGAIDEK
DLYRYQSPAAKWLFGFNTQLTYKKWSAATTLRANVGNYVFNNTKMNLSAWETVQYVDPAI
NNLHRDYLNTGFQSRQYYSDYYVENASFLRMENISLGYSFGKLGKISNLRAGAVVQNVFV
ISKYSGIDPEVPSGFDSSFYPRSRTFSLSLNLDF
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttttgcatttaaaacaagtgtgttaggcttgtcgctgctatccacattgggg
ctagcgacgacagtgcatgcagctatcccgaggcccagcagtagcctgagatcggcatgg
cagcaggaggtgcgtggtatcgtgcgtaatgaaaacggcgaggccatggcgggggtaacg
gtactcgtggtgggaacaacggtgggcacatcgaccggggaagatggttcctatcgtgtg
ctgttgccgacgggcaaaacacaactggcgttctctattttgggctacagtagccaaaca
cttcaagtgacgggaacgacgttggatgtgcagttgaagccaacgggcaatgaactggag
gagctggtggtggtgggctatggcagcacaaccaaaaaagatctgacgggcgcagtaaac
accgtaagcagtaaagattttaacacgggtttggtaggctcgcccgaacaattgataaac
ggtaagacggctggggtgcaggtcatgtccaacagtgggtccccctcggcaggaagcagc
atccgtattcgtggtggtgcctcgttgagcgccagcaacgatccgctaattgtgttggat
ggggtgcccttggaaacaggcggcatcagcggaaatagcggtaactttttgagcttgatc
aatcccaatgatatcgaaagcatgacggtgctcaaagatgcatcggctacggcaatctat
ggttcgcgtgcatccaacggggtgttactgatcacgaccaagaaaggtaaaggcgacgcc
ttgcgcctctctttctcctctatcgtatcgatgcagcaggcactgggcgtcgcggatatg
atgtcgcgcgatgaatttgccgagctgatcaacagccggggtacagccgcacagaaggca
cttttgggggaagcttccacagactggctcgaccaggtatttcagcaggccataggcaca
gacaacaacctgagcctacaggggaagattgccaagaccttgccttttcgcgcttcggtg
ggctactatgaccagcaaggtaccttgcgtaccgatcgcagcgaacgtatgaccggatcc
ttggtgctgagccctacattctttgatcagcatttatccgtaaaccttaacctgaagggc
gcgcgcaacaataaccgttttgccaatacagatgcgatatggtcggccattgcgtttaac
cctacacagccaatttattcaggcttggatacctatggtggttactatgagagcctagac
aatgccggtctgccggctacgggggccaatctaaatcccttaggtttattgaaccaagag
cgacaccgcagcacggtaaatcgcggcatcggaaacttagatatggactacaaattccat
ttcttgccggaattgaaagcgcatgtaactttaggctacgactatgccaaaggaaatggc
tttaaccatatcccggccagcgcagccaacaacttcaccattcaaggggcatatgatcgc
tatgcacaaacgctggaaaatagattgtttacgggatacctgaactacaacaagagcttg
cccgctataaaaagtacggtggaggtgacagcaggacatgactaccaatattggagcgcg
gaacgcccacccattgtgtaccttaatgatttaggggatgtgcgctctacggctatcgcg
tcggacgaaagacatgcccttatctcttggtatggtcggttgaactacaactttgatagc
cgctacttgctcacggccacgatccgtaaggacggcacttcacgctttagcccagagaac
cggtggggtacatttccatcgctggccttggcctggcgcctctcggaggagtctttcctg
aaagatgtttcgtttttggacgacctgaagctgcgggccagctatggggtgacggggcag
caggagggcatcggcaactatgaatacctgccggtctataacctgggtacacagtatgcc
caataccgcttcggcgatcaataccacttggtgtaccgcccttcggtttacaatcgggat
ttgcgctgggaaaccaccaaggctttcaactatggcgtggatttctcgctgtggcagggc
cgtgtatcgggatcggtagaatactatacccgtaaaacacacgatctattggccaacgtg
ccagttgccgctgggacaaactttgaccagaatgcaacaatcaatgtgggcaacgtggaa
agcagtggtctggaatttcaactgaatacagtgccgatacaaacggataacctacgctgg
gaggtcaacgtgaatgcgacaaaccagcatattaaggtcacgaatatagccttggtgcag
gatgcgaactcggtgggcacctatgtaggcccggtagtgagcggccgcggcatacagatc
ttgacgacaggataccaaccctacatgttctacgtctacaaacagctgtatgacgagggc
ggaaagcccttggaaggcatttatgccgacctgaacggcgatggtgcaattgacgagaaa
gatctgtatcgctaccaatcgccggcggctaaatggctgtttggtttcaatacccagttg
acctacaagaaatggtcggccgcgaccacgctacgagccaatgtgggcaactatgtgttc
aataatacgaaaatgaacctaagtgcttgggaaacggtacagtacgtggatccggcgatc
aacaacctgcaccgtgactacctcaatacgggttttcaaagtagacagtattactcggac
tactacgtagagaatgcttccttcctgcgtatggagaatatctctctgggctacagcttt
ggtaaactgggcaaaatatccaacttacgggcaggagccgttgtgcagaatgtattcgtg
atcagcaagtacagcggtatagatccggaggtaccgagtggttttgatagctccttctat
ccgcgttcgcggaccttctcgctgagcttgaatcttgatttttaa
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