Sphingobacterium bambusae: SCB77_20130
Help
Entry
SCB77_20130 CDS
T09645
Symbol
secDF
Name
(GenBank) protein translocase subunit SecDF
KO
K12257
SecD/SecF fusion protein
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam02024
Quorum sensing
sbam03060
Protein export
sbam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
SCB77_20130 (secDF)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCB77_20130 (secDF)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCB77_20130 (secDF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sbam02044
]
SCB77_20130 (secDF)
Secretion system [BR:
sbam02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
SCB77_20130 (secDF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
YolC_YozM
Motif
Other DBs
NCBI-ProteinID:
WPL48260
LinkDB
All DBs
Position
complement(4856370..4859375)
Genome browser
AA seq
1001 aa
AA seq
DB search
MQSKGLIKFLVIVVSIACLYSLSFTFVTRKVERDASEYAKGDMAKEKAYLDSMAGEEVYN
LGLAKFTYREAKAHELALGLDLKGGMNVTMEISLDELIKNLANNPKDDKFNTALETAVQK
SKSVNKSVVELFVDEYKAGGASTPLATFFATKDNSALIKATSSDADVRNFLSKEADNAIQ
NSYKVLRTRIDKFGVASPNIQIQQGTNRILIELPGVNDEIRVRKLLQGSAKLEFYATHDN
FQVYPLLENINNILASSLKTNTPAAAKPVVAANDSTATADSTKNDDNLLANLGAAKKDST
DSTAVSAELAASNPLFALLNPATAMGQNGQPTLMAGPMVGIASLKDTARVNAYLNRPEVK
ATIPGNLKLLWAVKPEQRTPNFLSLYAIKTSGTDNGAVMTGEVITDATDNVDQQNRPVVS
MQMNTEGARQWRRITAQAAQNREAIAIVLDGVVYSAPSVNEEIPNGSSQISGSFTFEDTK
DLANILKAGRLPATAKIVEEAIVGPSLGQAAIDAGVNSAVIGIVVVMIFMIAYYNRAGIA
ANIAVLFNVFFLMGILASLNAVLTLPGIAGIVLTMGTAVDANVLIYERIREELRAGKSIR
QAIADGYKHAMPSILDSQITTFLVGLVLFFFGSGPILGFATTLMIGIITSLFTSIFISRL
IFEYMLDKDMKISVSYPWSAKTLQNANFQFIKKRKLFYAISVVAVVISVGSIFTKGFSLG
VDFKGGRTYTVRYEQPVNLEDVRKNLDETFNSTTEVKTFGSENQVRITTTYHIEETSDEA
DAEVLAKLNEGLSKISGNKHEILSSQKVGPSIATDIKDRAIWSGVFSILIIAGYILVRFR
KWQYSAGAAVATIHDGVILLGLFSILDGIVPFSLDIDQHFVAAILTVLGYSVNDTVVVFD
RIREDLSKPGAHSKDFGEVVNHAINTTLSRTVITSLTIIFVLVVLFIFGGEVIRGFSFAI
LIGIIVGTYSSIILAAPAVYDLGKGKHISEEKVPAAKVVAP
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtaaagggctgattaaatttttggtaatagtggtgtcaatagcatgcctctat
tccctatcattcacatttgttacacgaaaagtagaacgagatgcttccgagtatgccaaa
ggcgatatggccaaagaaaaggcatacctcgattcgatggcaggtgaagaggtttataat
ttgggacttgcgaagttcacttacagagaagctaaagcacacgagctggcgctaggtctg
gatcttaaaggtgggatgaacgtaaccatggaaatatccttggacgagttgatcaaaaac
ttagcaaacaatcctaaagacgataaattcaacacagctttagaaacagctgttcagaaa
agtaaatccgtaaacaagagcgttgttgagctttttgtggacgaatacaaagctggcggt
gcttctaccccattagcgacgttcttcgcaacaaaagataactccgcattgatcaaagcg
accagctcagatgctgacgttcgtaattttctaagcaaggaagcagacaatgctatccaa
aactcctacaaagttttacgtacgcgtattgacaagtttggggtagcgtcgccaaacatc
caaatccaacaaggtaccaaccgtatcttgattgaattgccgggtgtgaatgacgagatt
cgtgtacggaagcttcttcaaggatcggctaaattggaattctatgctacgcatgataac
ttccaagtttatcctttgttggaaaacatcaacaatattttagcttcatcgcttaaaaca
aatacgccagcagcagcaaaacctgttgtggcggcaaatgactctacagcgactgcagac
agcaccaaaaacgacgacaatctattggccaacctaggtgcggcgaaaaaggatagcaca
gactccacagccgtttcggccgaactagctgcaagcaaccctttatttgcactattgaac
ccagcaacagcaatgggtcaaaatggtcaacctaccttgatggctggcccgatggtaggt
atcgcgagcttaaaagatacggcgcgcgtaaatgcttacctaaatcgtccggaagttaag
gcaaccatcccaggcaaccttaagcttttatgggctgttaaaccggaacaacgcacacca
aacttcttgtcgttatatgccatcaaaacatccggcacagataatggtgctgtgatgact
ggtgaagtaatcaccgatgcgactgataacgtggatcaacaaaacagacctgttgtatcc
atgcaaatgaacactgaaggagcgcgtcaatggcgtcgtatcaccgcgcaggctgctcaa
aatagagaagctattgcaatcgtattggatggtgtggtatactccgctccttccgtaaat
gaagaaattccaaatggtagctcccaaatctctggtagcttcaccttcgaagacaccaaa
gatttagctaacatcttgaaagctggacgtcttccagcaacagctaaaatcgtagaagag
gctatcgttggtccttcattaggacaagcggctatcgatgcgggtgtaaactctgcggtt
atcggtatcgtagtcgtaatgatctttatgattgcctactacaaccgtgcaggtatcgca
gcgaatatcgcggtattgttcaacgtatttttcttgatgggtatcttggcttccctgaat
gcggtattgacccttccaggtattgccggtatcgtgttgaccatgggtacagcggtggat
gccaacgtactaatctatgagcgtattcgtgaagaattacgtgctggtaaaagcatccgc
caggctatcgccgacggttacaaacatgcaatgccttccatcttggattcacagatcacg
accttcttggttggtttagtattgttcttcttcggaagcggaccaatcttaggctttgcc
actaccttgatgatcggtatcatcacttccctattcacgtctatcttcatctctcgtttg
attttcgagtacatgttagacaaagacatgaagatttcggtatcctacccttggtcggct
aaaacacttcaaaatgcgaacttccagttcatcaaaaaacggaagttgttctacgctatt
tccgtagtagcagttgttatcagtgtagggtctatcttcactaaaggtttctctttaggc
gtagacttcaaaggtggacgtacctacaccgtgcgctatgagcaaccggtgaacttagaa
gatgttcgtaaaaacttggacgagaccttcaactcgactacagaggtgaaaactttcggt
agcgaaaaccaagtgcgcataacaacgacttatcacatcgaagaaacaagcgacgaagcg
gatgcagaagtattggcgaaattgaacgaaggtctttccaaaatttctggcaacaagcat
gagattctttcttcgcaaaaagtgggaccaagcatcgctacagatatcaaagatagagct
atctggtctggtgtattctcgatcttgattattgcaggatatatcctagtacgtttccgc
aaatggcaatattctgctggtgcagctgtcgcaactatccatgacggggtgattttattg
ggtcttttctccattttggacggaatagtacctttctctttagatatcgaccagcatttc
gtagcggcgattctaacggtattaggttactcggtgaatgacacggttgttgtatttgac
cgtatccgtgaagacttgagcaaaccgggtgcacacagtaaagatttcggtgaggtggta
aaccacgcaatcaacactacgttaagccgtacagtaatcacttcccttacgatcatcttc
gtgttggtggtattattcatcttcggtggtgaggttatccgcggattctctttcgccatc
ttaatcggtattattgtgggtacttactcctcgattatccttgctgctcctgctgtttat
gacttgggcaaaggaaaacacatctcggaagagaaggttcctgctgcaaaagttgttgcg
ccgtaa
DBGET
integrated database retrieval system
