Sphingobacterium bambusae: SCB77_20905
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Entry
SCB77_20905 CDS
T09645
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam00300
Lysine biosynthesis
sbam00470
D-Amino acid metabolism
sbam01100
Metabolic pathways
sbam01110
Biosynthesis of secondary metabolites
sbam01120
Microbial metabolism in diverse environments
sbam01230
Biosynthesis of amino acids
Module
sbam_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SCB77_20905 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SCB77_20905 (lysA)
Enzymes [BR:
sbam01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SCB77_20905 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF693
Motif
Other DBs
NCBI-ProteinID:
WPL48411
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All DBs
Position
5043128..5044294
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AA seq
388 aa
AA seq
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MLFNKSQEEKIKHLETPFYYYDLALLNTTLDQAKAAADKYDFHVHYALKANFNDRLLETI
QGKGFGADCVSGNEVQKAIDSGFPASKITFAGVGKSDKEIRMALKHGIFTFNVESIQEME
VINELAEEEGVVASVSLRINPNVDAHTHHYITTGLDENKFGVPTSELEKAAAVIRKSANV
ELMGLHFHVGSQITDMNVFKSLCVKVNEWKNWFEERGTQIKVLNVGGGLGVDYQQPDAHP
IPDFEAYFAVFDKFLERSAQQEVHFELGRALIAQCGSLVSKVLYTKSGIKKHFLVLDAGM
TELMRPALYQAYHQIERVGGDHAQAATLNYDVVGPICESSDCFGKEVPLPESKRGDLIAI
RTAGAYGEVMASRYNLRDEIRYVYDSEL
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttaacaagtctcaggaagagaaaataaagcatttagaaacacccttttattac
tacgacttagcgctgctgaatacaaccttggatcaggccaaggcagctgccgataagtat
gattttcatgtacactacgccttgaaggcaaacttcaacgatcgtttgttggagactata
caagggaagggctttggcgcggattgcgttagcggcaacgaggtgcagaaagctatagac
agcggctttccggccagcaagatcacttttgccggtgtgggcaaatccgataaggagatc
cgtatggccctaaagcatgggatctttacgttcaacgtggagtctatccaagaaatggaa
gtcatcaacgaactggcggaagaagaaggggtagtggctagtgtatcgctacgcatcaat
cccaatgtggatgcgcacacgcaccattatatcacgacggggctcgatgagaacaaattt
ggcgtgccgacctccgaattggagaaagcggcggctgtgattcgcaagtcggccaatgtg
gaactgatgggcttacatttccatgtgggctcgcagattacagatatgaacgtgttcaaa
agtttgtgtgtcaaagtgaacgagtggaagaactggtttgaggagcgtggaacgcaaatc
aaagtgcttaatgtaggcggcggactgggcgttgattatcagcagccggacgcgcatcct
attccggactttgaagcctattttgcggtgttcgacaagtttttggagcgctcggcgcaa
caagaggtgcactttgagctgggccgtgccctgatcgcgcaatgtggatccttggtgagc
aaggtgctgtataccaaaagcggtatcaagaagcactttttggtgctcgacgcagggatg
actgagcttatgcggccggctttgtaccaagcctatcaccagatagaacgggtgggcggc
gaccatgcacaggcagcaaccttaaactatgatgtggtaggtcctatttgcgagagctcg
gactgctttggtaaggaagtgccactaccggagtctaagcgtggcgatctaatcgctata
cgtacggccggtgcatatggtgaggtgatggcttcccgctataacctgcgcgacgaaatt
cgttatgtatacgacagtgaactgtaa
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