Segatella baroniae: L6469_00440
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Entry
L6469_00440 CDS
T09580
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sbao
Segatella baroniae
Brite
KEGG Orthology (KO) [BR:
sbao00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
L6469_00440
Enzymes [BR:
sbao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
L6469_00440
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GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
UKK78211
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Position
1:108368..110419
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AA seq
683 aa
AA seq
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MMNKLFASLVLIGGFSVNSFAQKPGTPASQMEKLDRGVIATLSQPGKYFLSWRYLANDDK
NTSFRVLRDGKVVADHLTQATSMEIDGKPDSKFQVVTLVNGVAKDISKAITPSALPYMTL
RLNCPPNGESWRYTPNDCSVGDVDGDGQYELIVKWDPSNSHDNSHRGYTGNTYIDCYKFD
GTQLWRVDLGKNIRSGAHYTQFMVYDFDGDGKAEMICKTAPGTLDGKGHYVNQAATDVKI
KSENNQVDYRNNQGLIMSGPEYLTVFEGQTGKAVHTIYYNPNREGTFNQVGQYPDKSFWG
DEYANRSERYLAAVAYLDGPNALPSAVMCRGYYTRSYLWAVDYQNGKLNTKWLHASVSNT
EVDRYDAHWNKTVKTYQHNTFNDIHGAFTAYGQGAHSLSVADVDGDGCDEITYGSAAIDH
DGNLLYSTGLGHGDAQHLSDFDPDRPGLEYFMVLENDPYGFNYRDARTGEVLLYHTAKDD
TGRGLMADIDSTHRGAEYSYIGQPSTFDIKGSVISTVKWLPNDQNSHVRRPRGNGERNRG
FNIWRSMMGMNFRIYWDGDVYDEMLNGNSITKWNGGKEVKELGVGDKALRELGNPQSCNG
SKSTPCLQADLFGDWREEVILRDREDPSLLYIYSTQTPTPYRVPCLMQDHVYRMGVAWQN
VSYNQPPHLGYYLPDYIETFQRK
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaaattatttgcatcgttagttctaataggtggcttttctgtgaatagtttc
gcacaaaagccggggactcctgcgtctcaaatggagaaactggacaggggcgttattgct
actttatcgcaacctggaaagtacttcttgagttggcgctatttagcgaacgatgataaa
aatacttctttccgtgtcttgcgagatggtaaagtggttgctgatcatcttacacaggct
actagtatggagattgatggaaaaccagatagtaagtttcaggtggtaactttggttaat
ggggtagcgaaggatatttctaaggcaattactccttctgctttgccgtatatgactttg
cgactgaactgtcctccgaatggagaaagttggcgttatacccctaatgattgttcggtg
ggtgatgtggatggcgatggacagtatgaactgattgtgaaatgggatccatcgaatagt
catgataatagtcatcgaggctatacgggtaatacttatatcgactgttataagtttgat
ggtacacagttatggcgtgtcgatttaggtaagaatatccgttcgggtgcgcattacacc
cagtttatggtttatgatttcgatggcgacggtaaggctgaaatgatttgtaaaacagct
cctggtaccttggatggaaaagggcactatgtaaatcaggcggctacagatgttaagata
aaatcagagaacaatcaggtggattatcgcaataatcagggccttattatgagtggtccc
gaatatttgacggtgtttgaaggacaaacaggcaaggctgtccatacgatatattataat
ccgaatcgtgagggaactttcaatcaagtaggtcagtatccggataaatcgttttggggt
gatgagtatgccaaccgctctgaacgttatttggcagctgtggcttatttagatggtcca
aatgctctgccaagtgcagtgatgtgcagaggatattatacccgaagttatctgtgggca
gtagattatcagaatggtaagctcaatacgaaatggcttcatgcttctgtgtcgaatacg
gaggttgaccgctatgatgctcattggaataagacggttaaaacttatcagcataataca
ttcaatgacattcatggggcatttacggcttatggacaaggagcccatagcctcagtgtg
gctgatgtagatggtgacggttgtgacgagattacctatggctcggctgctatcgatcac
gatggtaacttactttattctacaggattaggtcatggcgatgctcaacatttaagtgat
tttgatccagaccgtcctggtttggaatactttatggtcctcgagaacgatccctatgga
ttcaactatcgtgatgctcgtactggtgaggtcttgctatatcatacagctaaagacgac
acggggcgtggacttatggctgatattgactctactcatcgtggtgcagaatatagttat
ataggtcaaccttcaacttttgatattaagggtagtgtgatttcaacagttaagtggctt
ccaaatgatcagaatagtcatgtcagaagaccacgaggtaatggcgagcgtaacagaggt
tttaatatctggcgcagtatgatgggtatgaacttccgtatttattgggatggcgatgtt
tatgatgaaatgctcaatggtaactcgattacaaaatggaatggaggtaaagaggtgaaa
gaactcggtgtgggggataaagctcttcgcgaattaggtaatccacaatcttgtaatggt
agtaagagtaccccatgcttgcaagcagatctctttggcgactggcgtgaagaagtcatc
ttacgagaccgtgaagatccaagtttgctctatatctattctactcaaaccccaacccct
tatcgagtgccttgcttgatgcaagatcatgtgtatcgcatgggggtggcttggcagaat
gtgtcgtataatcagcctccacatttaggctattatctgcctgactatatcgagaccttt
cagagaaaataa
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