Segatella baroniae: L6469_04660
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Entry
L6469_04660 CDS
T09580
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
sbao
Segatella baroniae
Pathway
sbao00541
Biosynthesis of various nucleotide sugars
sbao01100
Metabolic pathways
sbao01250
Biosynthesis of nucleotide sugars
Module
sbao_M00063
CMP-3-deoxy-D-manno-octulosonate biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
sbao00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
L6469_04660 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sbao01005
]
L6469_04660 (kdsB)
Enzymes [BR:
sbao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
L6469_04660 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
sbao01005
]
Lipid A
L6469_04660 (kdsB)
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GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
Fer4_12
MLPTv-like_HTH
Motif
Other DBs
NCBI-ProteinID:
UKK78977
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Position
1:1093281..1094024
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AA seq
247 aa
AA seq
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MKFIGIIPARYASSRFPGKPLAILGGKPVIQRVYEQVNKLLDNVYVATDDQRIYDCVKNF
GGKVVMTKNNHKSGTDRIEEAIEKIGGDWDVVVNIQGDEPFIQKEQILSLCECFKDPNTQ
IATLGKPFTTMDAVTNPNSPKIVLDNQNFAMYFSRSIIPYIRGKQTNEWINSYNYIKHLG
IYAYRKDILQEITKLPQSSLEIAESLEQLRWLQNGYKIKVGITEIETVGIDTPDDLVRAE
EFLKLQK
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttataggaattattccagcacgttatgcaagtagtagatttcctggcaaacct
cttgccatcttaggtggaaaacctgtaatacaacgcgtttacgagcaagtgaacaagcta
ttagacaatgtttacgtagccactgacgaccaaagaatttacgattgcgtcaagaatttt
ggcggaaaagttgtcatgactaaaaataatcataaaagtggaactgatcgcatcgaagaa
gcaatcgagaaaatcggcggagactgggatgttgttgtaaatattcagggcgacgagcca
ttcattcagaaagaacaaattttatcattatgtgaatgttttaaagaccccaacactcaa
atagccacacttggaaaaccttttaccaccatggatgcggtaactaatcctaacagccca
aaaattgttttggataaccaaaattttgcaatgtatttctctagaagtatcattccatat
atccgcggtaaacaaacaaatgaatggattaatagttacaactatatcaagcatttaggt
atatatgcttacagaaaagatatacttcaagaaatcaccaaattacctcaaagcagttta
gagattgcagagagtttggaacagctaagatggctacaaaatggctataaaattaaagta
ggaataacagaaattgaaacggtaggaatcgatactccggacgatttagtacgagcagaa
gagttccttaaattacaaaaatga
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