Segatella baroniae: L6469_05260
Help
Entry
L6469_05260 CDS
T09580
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sbao
Segatella baroniae
Pathway
sbao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L6469_05260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbao03019
]
L6469_05260
03400 DNA repair and recombination proteins [BR:
sbao03400
]
L6469_05260
Enzymes [BR:
sbao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L6469_05260
Messenger RNA biogenesis [BR:
sbao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L6469_05260
DNA repair and recombination proteins [BR:
sbao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L6469_05260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
TrmB
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UKK79095
LinkDB
All DBs
Position
1:1242731..1244623
Genome browser
AA seq
630 aa
AA seq
DB search
MDYLKILHQYWGYPDFRGIQREIIESIGKSQDTLGLMPTGGGKSITFQVPALAKDGVCIV
ITPLIALMKDQVAHLKDKGILADAIYSGKNHSEIIQILENCIFGRTKFLYVSPERLSTEL
FQTKLKHIKVSFITVDEAHCISQWGYDFRPSYLKIADIRKMKPGVPILALTATATPEVID
DIQEKLDFKHKNVFRMSFERKNLAYVVRKTADKYGELIHILSSVPGCGIVYVRSRKRCKE
IASMLNDSGISSTFYHAGLDPIIKDERQKAWQNNEKRIIVATNAFGMGIDKPDVRIVVHI
DCPDSLEAYFQEAGRGGRDGQKAYAVLLYNDNDKLKLHKRVIDTFPEKDYIRNIYEHLAY
FYQIGVGSGYGNTFEFHIDKFSYTYKFFPIPVNSSLHILDRCGYIHYEDNPDSKARLRFI
LGRNDLYQLNSLSANEELIITELLRDYGGLFTDYVYIDEFLIAQKTNIPLENIYLILKNL
SARHIINFIPRRKMPYITYLRDREDGINIKIPSSVYENRKEQFVKRIEAMINYAENDYVC
RSRQLLLYFGEDNNHDCEQCDVCLTHHTQTSQKDIEQAKKDILQYLSDKETHLITELKTL
NLPEKIFDEALESLILENQVFIEYSEIRIA
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggattatctaaagatacttcatcaatactgggggtatcctgactttcgcggtattcaa
agagaaatcattgaatctatcggcaaaagtcaggatactcttggacttatgcctactggt
ggtggaaaatctatcacctttcaagttcctgcacttgcaaaagatggtgtctgcattgta
ataacaccactcatcgcactaatgaaagatcaggtggcccatttaaaggacaaaggtatt
ttggctgatgctatttattcgggcaaaaaccattctgaaatcattcaaatactcgaaaat
tgcattttcggaagaacgaaatttttatatgtttcgccagaacgtttatctactgaacta
ttccaaacaaaacttaaacatattaaagtgagctttatcaccgtagatgaagcacactgt
atcagccaatggggatatgactttcgtccgtcatacctaaaaattgccgacatcagaaaa
atgaaaccaggcgtgccaatcctggcccttacagctacggcaactccagaagtaattgat
gatatccaagaaaaacttgatttcaagcataaaaatgttttccgcatgagctttgaacgc
aaaaatttggcttatgtggtacgaaagactgctgataaatatggagaacttattcatata
ctatcttcagtaccaggatgtggcattgtatatgttagaagtcgaaaacgatgcaaagag
attgcctctatgctcaatgatagcggaataagctctactttctatcacgcggggttagac
ccaatcatcaaagatgaacgacaaaaggcttggcaaaataatgaaaaaagaatcattgtt
gccacaaatgcctttggtatgggtatcgacaaacctgatgtacgcatcgttgtacacatc
gactgtcccgactccttagaagcatatttccaagaggcaggccgtggtggaagagacgga
caaaaagcttatgctgtactattgtacaatgataatgacaaacttaaacttcacaaacgt
gttatcgatactttcccagagaaagattatattagaaacatatacgaacatctcgcttac
ttttaccaaattggtgtaggaagtggatatggaaatactttcgaatttcatattgataag
tttagttatacatataaattctttcctataccagtaaacagttcactacatatcctggat
cgatgtggatatattcattatgaagataatcctgacagcaaggcacgcttgcgctttata
ttagggagaaatgatttgtatcagctgaattcactttccgcaaacgaagaactcatcata
acagaattacttcgtgattatggaggactttttactgattacgtctatatagacgaattt
cttatagcacaaaaaacgaatattcctttagaaaacatttatctgatactaaaaaatctt
agtgcaagacatatcatcaactttattccaagaagaaagatgccatacattacctatcta
cgagacagggaagatggcataaatattaagataccatcatcagtatatgaaaatagaaag
gaacagtttgtcaaacgaattgaagctatgatcaactatgctgaaaatgattacgtctgc
agaagccgacaacttcttttatacttcggtgaagataataatcatgattgtgaacaatgc
gatgtatgcctaacccaccatacacaaacatcacagaaagacatagaacaggctaaaaaa
gacattctacaatacttaagtgacaaagagactcatttaattactgagcttaaaacttta
aatcttccagaaaagatatttgatgaagcattagaatcgctcattctagaaaatcaggtt
tttattgagtattcagaaatcagaatagcataa
DBGET
integrated database retrieval system
