Segatella baroniae: L6469_06360
Help
Entry
L6469_06360 CDS
T09580
Name
(GenBank) chromophore lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sbao
Segatella baroniae
Pathway
sbao00040
Pentose and glucuronate interconversions
sbao01100
Metabolic pathways
sbao02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbao00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
L6469_06360
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L6469_06360
Enzymes [BR:
sbao01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
L6469_06360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectate_lyase_5
Motif
Other DBs
NCBI-ProteinID:
UKK77406
LinkDB
All DBs
Position
1:1516975..1518186
Genome browser
AA seq
403 aa
AA seq
DB search
MMNKLLLSAMALLFSALHIQAQTISNAYDDGKPLGWGASVTGSNDENPITVTNYTEFVNA
CKVTTNKTIYVKGEISFSGSYSLNTSNKTIYGLPGSALVNTNRTDKSKTGILTIKGDNII
LRNLTFKSAGAYDIDGNDNITVDGATNVWIDHCDIQDGVDGNLDVVNGADKVCISWTRFR
YLIEPLANGSGGSDDHRNCNLIGNSDKNANEDTDKLRVTFKNCWWDEGCHERCPRVRFGK
VHIANCLFSSSVVSYCIGYGYKSNIYAEGNAFTSAKAKKTPWKNYATSGSYTDYNITTKD
NLGVNEEIQAKSGSEDYWIPSTDYSMSVYDASLVESVVGNEENGAGATLTINEGEAYTTG
IETIAVETSLTNEDHAIYNQAGQRVNSNYRGLVIKNGKKYIQK
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacaaactacttttatctgctatggcacttctttttagtgccttgcatattcaa
gcgcaaaccatatcaaatgcatatgacgacggaaagcctttaggatggggtgctagtgta
accggtagcaatgatgaaaatcctataacagtaacaaattatactgaatttgtaaatgct
tgtaaagttaccacaaacaagacaatttacgtaaaaggggaaatcagttttagcggatca
tattctctcaatacaagcaacaagactatttatggacttccaggttctgctcttgtgaat
acgaacagaactgataagagcaaaacgggtattcttactataaaaggtgacaatatcatc
cttcgcaatcttacatttaagagtgcaggagcttacgatatcgatggtaatgacaatatt
accgtagatggtgccactaatgtatggatagaccattgcgacattcaagatggtgtagac
ggtaatcttgatgtggttaatggtgcagataaagtatgtatatcttggacacgtttccgc
tatttgatagagcctttggctaatggttcaggtggctctgacgaccatcgtaactgtaac
ctgattggtaacagcgataagaatgctaatgaagatacagataaacttcgggttaccttt
aaaaactgttggtgggacgaaggatgccacgaacgctgtccacgtgtacgcttcggcaaa
gtacacattgccaactgccttttctcttcttctgtggttagctattgtattggctacggc
tataaaagtaatatctacgctgaaggtaatgcttttacttcagctaaagcaaaaaagact
ccatggaagaattatgctaccagtggttcatataccgattataatatcacgactaaagac
aacttgggcgtaaacgaagaaattcaagcaaaatcaggaagtgaagactattggattcca
tcaactgattactctatgagtgtatatgatgcgagtttagttgaatctgtagtaggcaac
gaggaaaatggcgcaggtgcaaccttaaccattaatgaaggcgaagcatatacgacaggc
atcgaaaccattgctgtagaaacatctttgacaaatgaagatcatgcaatctataaccaa
gcaggtcagagagtcaatagtaactaccgcggtttagttattaaaaacggtaagaaatat
attcaaaagtaa
DBGET
integrated database retrieval system
