Segatella baroniae: L6469_06970
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Entry
L6469_06970 CDS
T09580
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sbao
Segatella baroniae
Pathway
sbao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L6469_06970 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbao03019
]
L6469_06970 (recQ)
03400 DNA repair and recombination proteins [BR:
sbao03400
]
L6469_06970 (recQ)
Enzymes [BR:
sbao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L6469_06970 (recQ)
Messenger RNA biogenesis [BR:
sbao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L6469_06970 (recQ)
DNA repair and recombination proteins [BR:
sbao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L6469_06970 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecQ-1-like_HTH
DEAD
RQC
Helicase_C
RecQ_Zn_bind
HRDC
HTH_40
ResIII
Helicase_Sgs1
GTP1_OBG
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
UKK77520
LinkDB
All DBs
Position
1:complement(1667740..1669920)
Genome browser
AA seq
726 aa
AA seq
DB search
MTKEVNLIDALKRYFGFDKFKGDQEAIIRNVLDGNDTFVLMPTGGGKSLCYQLPSLIMPG
TAIVISPLIALMKNQVDVINGMSEGDGVAHYLNSSLNKSAVEQVKSDIRAGKTKLLYVAP
ESLTKEDNVEFLKTVKISFYAVDEAHCISEWGHDFRPEYRRIRPIISQIGNAPVIALTAT
ATDKVRTDIKRSLGIADAHEFKSSFNRPNLYYEVRPKTKDVDKQIIMFIKQHPGKSGIIY
CLARKKVEELAEILKANDIKAAAYHAGLDSSTRSKTQDDFLMENIDVIVATIAFGMGIDK
PDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGKCIAFYAKKDLKKLEKFMEGKPVAEQDI
GRQLLQETAAYAESSVCRRKMLLHYFGEEYEQDNCGNCDNCKHPKTKIDGKDALLIILKA
VAAVKENFRQEYIVDFVKGRGTDDIVSHKHDQLDEFGAGADMDNKLWNPVIRQALLAGYL
RKDVENYGLLKLTASGKRYIKSQEPFMIVMDNEFTDDYVDDSNEAGGTSALDPELFSILK
DLRKKTAHKHQLPPYVIFQDVSLEQMATMYPVTQEELTNVQGVGIGKAKRYGKEFLKVIK
EYCEEKQIVPPEELRVRTVAKKSMLKVSIIQSIDRKMALDDLADAKGLDFSDLLDEIEAI
VYSGTKLNIDYFIEDVVDDDKVDDIYDYFMESETDDLNEALDELGDDYSEDEIRLVRIKF
LSENAN
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaagaagttaatcttatagatgcactaaagcgctactttggctttgataaattt
aaaggcgatcaggaggctattatccgtaatgttcttgatggcaacgatacgtttgtattg
atgccgacaggaggcggtaagagtttgtgctatcagctaccttctttaattatgcctggt
acggcaatagttatttctccattaatagctttgatgaaaaatcaggttgatgttattaat
ggtatgagtgaaggtgatggcgtggctcattatttgaactcttcattaaataagtcggct
gtagaacaggtgaaatcggatattcgtgctggtaagactaaattgttgtatgtagctcca
gaatctttaacgaaggaggataatgtagaattccttaaaacggtaaagatttctttctat
gctgtagatgaggctcattgtatatcggaatggggacatgatttccgtcctgaatataga
agaattcgcccgataatcagtcagataggtaatgcgcctgttatagctttgaccgccact
gcaacggataaagttcgtacggatatcaagcgaagcttggggatagcagatgctcatgag
tttaaaagctcgtttaatcgtcctaacttgtactatgaagtacgtcctaaaactaaggat
gtagataagcagattattatgtttattaaacagcatcctggtaaaagtggtattatttat
tgtttagccagaaaaaaagttgaagagcttgcagaaattttaaaggctaatgatattaaa
gcagctgcttatcatgcaggattagattcttcaacgcgttcgaagacccaagatgatttc
cttatggaaaatatcgatgtcatcgttgcgactatagcctttggtatgggtatagacaag
cctgacgtgcgttttgttatccattatgatatacctaagagtctggaagggtactatcag
gaaacaggtagagcaggtcgtgatggtggagaaggtaaatgtatagccttctatgcgaaa
aaagatctgaagaaactagaaaaattcatggagggtaagcctgtcgctgaacaggatatc
ggtagacaattacttcaagaaactgcagcttatgcagaatcttcagtatgtcgtcgaaaa
atgctccttcattattttggtgaggaatacgagcaggataattgtggcaattgtgataat
tgtaagcatccaaagacaaaaatagatggcaaggatgctttgttgattattttaaaagct
gtagctgctgtaaaagaaaatttccgtcaagaatatattgttgactttgttaagggtaga
ggaactgacgatattgtatcgcataagcatgatcagctagatgagtttggtgcaggtgca
gatatggataataaattgtggaatccagtaattcgtcaggcgcttttggcaggttatctc
cgtaaggatgttgagaattatggcttgttaaaattaactgcttccggtaaacggtatatc
aagagtcaagagcctttcatgatcgttatggataatgagtttacagatgattatgtagat
gattcaaatgaggcgggtggaacaagtgctcttgatccagagttgttctctattttgaag
gatttacgaaagaaaacagctcataaacaccaattgccaccatatgtgatcttccaagat
gtttctttggaacagatggcaactatgtatcctgttactcaggaagagctgacgaacgta
caaggtgttggtataggaaaagcaaagcgatacggaaaagagtttttgaaagtcataaag
gaatattgcgaagaaaaacaaatcgttccacctgaagaacttcgtgttcgaacagtagcg
aaaaaatcgatgctgaaagttagtatcatccagtctatagaccgtaaaatggcattggat
gatctggcagatgccaaaggactcgattttagtgatctgctagatgaaatagaagccatt
gtatatagtggcactaaacttaacatagattattttattgaggatgttgtcgatgatgat
aaagtagatgacatttatgattatttcatggaaagtgaaacggatgatctcaatgaagcc
ttagatgaattaggagatgattacagtgaagacgaaattcggttggtaagaattaaattt
ctgtcggaaaatgcgaattaa
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