Segatella baroniae: L6469_08030
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Entry
L6469_08030 CDS
T09580
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sbao
Segatella baroniae
Pathway
sbao03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbao00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L6469_08030 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbao03021
]
L6469_08030 (rpoC)
03400 DNA repair and recombination proteins [BR:
sbao03400
]
L6469_08030 (rpoC)
Enzymes [BR:
sbao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L6469_08030 (rpoC)
Transcription machinery [BR:
sbao03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L6469_08030 (rpoC)
DNA repair and recombination proteins [BR:
sbao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L6469_08030 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Biotin_lipoyl_2
SSrecog
Motif
Other DBs
NCBI-ProteinID:
UKK77715
LinkDB
All DBs
Position
1:complement(1882906..1887240)
Genome browser
AA seq
1444 aa
AA seq
DB search
MAFKKETKVKNNFTKITIGLASPEEILENSYGEVTKPETINYRTYKPERDGLFCERIFGP
TKDYECACGKYKRIRYKGIVCDRCGVEVTEKKVRRERCGHIELVVPVAHIWYFRSLPNKI
GYLLGLPTKKLDAVIYYEKYIVVKPGVMEGKKDADGVELNGSHKMDLLSEEEYIDIIDNQ
IDPNNDRLADDDPNKFVAKMGAEAIYDLLTDIDLDGLSYKLRDMANNDSSQQRKTEALKR
LQVVEAFRTSKGINRPEWMIMKIIPVTPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNR
LKRLVEIKAPEVILRNEKRMLQEAVDSLFDNSRKSSAVKSESNRPLKSLSDSLKGKQGRF
RQNLLGKRVDYSARSVIVVGPELNMGECGLPKLMAAELYKPFIIRKLIERGIVKTVKSAK
KIVDRREPVIWDILENVMKGHPVMLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLACTAFN
ADFDGDQMAVHLPLSNEAVLEAQILMLESHNILNPANGAPITVPAQDMVLGLYYITKLRP
GAKGEGLTFYGPEEAIVASNEGKCDLHAIVKVVVDDIVDGKHVKHMVETSAGRVIVNQIV
PDEVGYFNDIISKKTLRGIIADVIGAVGMARACSFLDGIKNLGYRMSYEAGLSFNLDDII
IPEEKVAIVEKGNKEVEEITNNYNMGFITDTERYNQVIDTWTHVNNDLGNILMKEMREAD
QGFNAVYMMLDSGARGSKDQIKQLSGMRGLMAKPQKAGAEGAQIIENPILSNFKEGMSVL
EYFISSHGARKGLADTAMKTADAGYLTRRLVDVAHDVIITEEDCGTLRGLVCSALKNGDE
IISTLYERVLGRVSVHDVVDPTTGNLIVAAGEEITEPKAKAIENSPIESVEIRSVLTCES
KHGVCMKCYGRNLATARMVQLGEAVGVIAAQAIGEPGTQLTLRTFHAGGIAANAAANANI
TAKNDAKLEFDELRVVPFVEEDEEGNDINCQMVVSRLAEVRFVDPNTGIVLSSLNVPYGA
SLYKKHGDVVKKGDVICKWDPFNAVIVSEYAGVLKFNDVVEGQTYRAETDETTGLTEKII
TDSKNRSLVPTCDVVDAEGNVVGTYNFPVGGHVVVEDGQTISTGTTLVKIPRAVGGAGDI
TGGLPRVTELFEARNPSNPAIVSEIDGEVTMGKVKRGNREIIVTSKTGDQKKYLVPLSKQ
ILVQEHDAVRAGTPLSDGVTTPGDILAIKGPTAVQEYIVNEVQDVYRLQGVKINDKHFEI
IVRQMMRKVRIDDPGDTTFLEQELVDKLDFADENDRIWGKKVVTDAGDSELLKPGQIVTV
RKLRDENSSLKRRDLKLVQVRDAVPATSTQILQGITRAALGTKSFMSAASFQETTKVLCE
AAIRGKSDYLEGMKENVICGHLIPAGTGLRQWQKLVVGSKEEYERIQANRKNVLDFADNN
VATE
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggcttttaaaaaagagacaaaagtaaaaaataattttacgaaaattaccataggttta
gcttctcctgaagaaatcttggaaaattcgtatggcgaggttactaaaccagaaaccatt
aactatcgtacatataagcctgaacgagatggtcttttctgcgagcgtatttttggtcct
actaaggattatgagtgtgcttgtggtaagtataagcgtattcgttataaaggcattgtt
tgtgatcgttgtggtgtagaagttacagaaaagaaggttcgtcgtgagcgttgtggtcat
atcgaacttgtagtacctgttgctcatatttggtatttccgttctttgccaaataagata
ggttaccttctgggtttaccaacaaagaagcttgacgctgttatctactatgagaagtat
atcgttgtcaagccaggtgttatggaaggtaaaaaagatgccgatggtgtcgaattaaat
ggttctcataaaatggacctcctcagtgaagaggaatatatcgatattatcgataatcaa
atagatcctaataatgatcgtttggctgatgatgacccaaataagtttgttgctaaaatg
ggtgcagaggctatttatgatctcctgacagatatcgatcttgatggtctttcttacaag
cttcgcgacatggctaataatgattctagtcagcagcgtaagacagaagcattgaagcgt
cttcaggttgtagaagctttccgtaccagcaagggtattaacagacctgagtggatgatc
atgaagattattcctgttactccaccagaacttcgtccattggttccacttgatggtggt
cgttttgcaacttctgacttgaatgatctttatcgtcgtgttattattcgtaataaccgt
ttgaagagacttgtagaaatcaaggctccggaagtcattttacgtaacgaaaaacgtatg
cttcaggaggctgtggacagtttatttgataattctcgtaagagctcagctgttaagagt
gaaagtaatcgtcctttgaagtctttgtctgactctttgaaaggtaagcagggacgtttc
cgtcagaatttgttgggtaaacgtgttgactattctgctcgttctgtaatcgttgtaggt
cctgagctgaatatgggtgaatgcggtcttcctaagttgatggctgctgagctatataaa
ccatttatcattcgcaagcttattgagcgtggtatagtaaaaactgtaaagagcgctaag
aagattgttgaccgtcgtgaaccagttatttgggatatccttgaaaatgtaatgaagggt
catcctgttatgcttaaccgtgctccgacacttcaccgtttgggtattcaggctttccag
ccaaaattgattgagggtaaagcaattcagttacatccattggcttgtactgcatttaat
gcagacttcgatggtgaccagatggctgttcaccttcctttgagtaatgaagctgtattg
gaagctcagattttgatgcttgagagccacaatatccttaaccctgctaatggtgctcct
atcaccgtacctgcacaggatatggtgcttggtttgtattatattactaaattgcgtcct
ggtgctaagggtgaaggcttgactttctatggtcctgaagaggcaattgttgcaagtaat
gagggaaagtgtgatttacatgcgattgtaaaggttgtagtagacgatattgttgatggc
aagcatgttaaacatatggttgaaacatcagcaggtcgtgttattgtaaaccaaattgtc
cctgatgaggttggttacttcaatgatattatctctaagaaaactcttcgtggtatcatt
gctgatgtgattggtgctgtcggtatggcacgtgcatgtagcttcttggatggtatcaag
aatttgggttatcgtatgtcttatgaggctggtctttccttcaatcttgatgatattatc
attccagaagaaaaggtcgctatcgtagaaaagggtaataaggaagttgaggaaattacc
aataattataatatgggtttcatcacagataccgaacgttataatcaggtaattgataca
tggactcacgtaaataatgacttgggtaacattctgatgaaggagatgcgcgaggcagat
cagggtttcaatgctgtttatatgatgcttgattctggtgctcgtggttctaaagatcag
attaagcagctgtctggtatgcgtggtctgatggcaaaacctcaaaaagcaggtgcagaa
ggtgctcaaattattgaaaacccaattttgtcaaactttaaagagggtatgtctgtgttg
gaatactttatttcttcacatggtgctcgtaagggtttggctgatactgctatgaaaact
gcagatgctggttatttgactagacgtttggttgacgtagctcatgatgttattattact
gaagaagattgtggtacattaagaggcctagtttgctcggctttgaagaatggtgatgaa
atcatttcaacgttgtatgagcgtgttcttggtcgtgtatctgtacatgatgttgtagat
ccaactacaggtaatcttatagttgctgctggtgaagaaattactgagcctaaggccaaa
gctattgaaaattcgccaatcgaaagtgtagagatacgttctgtacttacttgtgaaagt
aagcatggtgtttgtatgaagtgttatggtcgtaacttggctacagctagaatggtacag
ctgggtgaagctgtgggcgttatcgcagctcaggctattggtgaacctggtacacagttg
actcttcgtacattccacgctggtggtattgctgctaacgctgctgctaatgctaatatt
acggcaaagaatgatgcaaaactagaattcgatgaacttcgtgttgttccttttgtagag
gaagatgaggaaggtaatgatattaattgtcagatggtagtaagccgtttggctgaggtt
cgttttgtagatcctaatacaggtattgttctttctagcttgaatgttccttatggtgct
tctttgtataaaaagcacggagatgtagttaagaaaggtgatgttatctgtaaatgggac
ccatttaatgccgttatcgtatctgaatatgctggtgttctgaagtttaatgatgttgtt
gaaggtcagacttatcgtgcagagaccgatgaaacaacaggcttgactgaaaagatcatt
actgattctaaaaatagatctttggttcctacatgtgatgtagttgatgctgaaggtaat
gtagtaggtacatataacttccctgtaggtggtcacgttgttgttgaagatggtcagacc
attagtacaggtacaacattggttaaaatacctcgtgctgttggtggtgctggtgatatt
accggtggtcttcctcgtgtaaccgagttgtttgaggcacgtaatccttctaatcctgct
attgtttctgaaattgatggtgaggttactatgggtaaggttaaacgtggtaatcgtgaa
atcatcgtaacttctaagactggtgaccaaaagaaatacttggttccattgtctaagcag
atccttgtacaggaacatgatgctgttcgtgcaggtacacctctttcagatggtgttaca
actccaggtgatattcttgctattaagggtcctaccgctgtacaggagtatattgttaac
gaagttcaggatgtttaccgtcttcagggtgtgaagattaatgataagcactttgaaatc
attgttcgtcagatgatgcgtaaggttcgtatcgatgatccgggtgatacaacattcctc
gagcaggaacttgttgataaactcgactttgctgatgaaaatgatcgtatttggggcaag
aaggtcgttacagatgcaggtgattcagaattgcttaaacctggtcagattgtgacggtt
cgtaagctaagagatgagaactctagcttgaagcgtagagacttgaagttagttcaggtt
agagatgctgttccagctacatctacccaaatccttcagggtattacccgtgcagctttg
ggtactaagagtttcatgagtgctgcatcattccaggaaactactaaggtactctgtgag
gctgcaattcgcggtaagagtgattaccttgagggtatgaaggaaaatgttatttgtggt
catttgattcctgcaggtacaggtcttcgtcaatggcagaaacttgttgtaggttcaaag
gaagaatatgagcgtatacaggctaatagaaagaatgttcttgactttgcagataacaat
gttgcaacagaataa
DBGET
integrated database retrieval system
