Segatella baroniae: L6469_08680
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Entry
L6469_08680 CDS
T09580
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbao
Segatella baroniae
Pathway
sbao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L6469_08680 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbao03019
]
L6469_08680 (pnp)
03016 Transfer RNA biogenesis [BR:
sbao03016
]
L6469_08680 (pnp)
Enzymes [BR:
sbao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
L6469_08680 (pnp)
Messenger RNA biogenesis [BR:
sbao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
L6469_08680 (pnp)
Transfer RNA biogenesis [BR:
sbao03016
]
Prokaryotic type
tRNA degradation factors
L6469_08680 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
RNase_II_C_S1
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
UKK77826
LinkDB
All DBs
Position
1:complement(2026527..2028773)
Genome browser
AA seq
748 aa
AA seq
DB search
MNVITKTVQLPDGRTITIETGKVAKQADGSAVLRLGNTVLLATVCAAKEAVPGTDFMPLQ
VDYREQYSAAGRFPGGFTKREGKASDEEVLTSRLVDRALRPLFPSDYHCEVYVQVMLLSA
DGVDQPDALAGFAASAAMACSDIPFDYTISEVRVARINGEFVINPTFQQMEEADMDLMVG
ATKDNIMMVEGEMKEVSELDLINALKAAHEAIKPMCDLQDELAKELGTDVKREYDDEIND
EELRQQIKDELYQPAYDINHKALPKQERNDSFDKLLADFLEKYDAAHEDLSADDLEEKHA
EAKRYYDDVLRDAMRRCILDEGLRLDGRATTDIRPIWCEVSPLPMPHGSAIFQRGETMSL
STCTLGTKMDEKLVDGVLNRSYQRFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRAL
KDQIPADYPYTVRLVSQVLESNGSSSMATTCAGTLALMDAGVPIKKPVSGIAMGLIKNPG
EDKYAILSDILGDEDHLGDMDFKTTGTRDGLTATQMDIKCDGLSFEILEKALMQAKAGRE
HILNEMMKTISEPRAELKPQVPRIEVFDIPKEFIGAVIGPGGKIIQQMQEETGATITIEE
TEGKGHVQVSAPNKESIDAALLKIRAIVAVPEVGEVYEGTVRSIMPYGCFVEILPGKDGL
LHISEIDWKRLETVEEAGLKEGDKIQVKLMEIDPKTGKYKLSRRALLEKPEGYVERERRP
RRGGDRRNNGGEHRRFEHQDNNDAQGAE
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattacgaaaacagttcaattgcctgatggaagaaccatcacaattgagacc
ggaaaggttgcaaaacaggctgacggttccgcagtattgagactcggaaataccgtactt
ctcgcaaccgtttgtgcagccaaagaggcagttccgggtacagattttatgcctttacag
gtagactaccgtgagcagtatagtgctgcaggtcgtttcccaggtggttttactaagcgt
gaaggcaaagcaagtgacgaggaggtcttgacatcacgtcttgttgaccgtgctcttcgt
cctttattcccatcggattatcattgtgaagtttatgtacaggtcatgttgctttctgca
gatggcgtagatcagcctgatgcacttgcaggttttgccgcatcagctgcaatggcttgt
tctgacatacctttcgattatactatttctgaagttcgtgttgcccgtattaatggtgag
tttgttatcaatcctacattccaacagatggaagaggctgatatggacttgatggttggt
gctaccaaagataatattatgatggtagagggtgagatgaaagaagtttcagaactcgac
cttattaatgcattgaaggctgctcacgaggctatcaaacctatgtgtgatcttcaggat
gaactggctaaagaactcggtactgacgttaagcgtgagtatgatgacgaaatcaatgat
gaggaacttcgtcagcagattaaggacgagctttatcagccagcttatgatatcaaccat
aaggctctgcctaagcaggagcgtaatgattctttcgataaattgcttgcagatttcctt
gagaagtatgatgctgctcacgaagatctttctgcagatgatttggaagagaagcatgct
gaggctaagcgttactatgatgatgtattgcgtgatgctatgcgtcgctgtatccttgat
gaaggtcttcgtcttgatggtcgtgctactactgatattcgtcctatttggtgtgaggtt
tctcctctgccaatgcctcacggaagtgctatcttccagcgtggtgagacgatgtctctt
tctacttgtacacttggtaccaagatggatgaaaagttggttgatggtgttcttaaccgt
agttatcagcgcttcctccttcactataatttccctccattctctactggtgaagcaaag
gctcagcgtggtgtaggtcgtcgagagatcggtcacggtcacttggcatggcgtgcgctt
aaggatcagattcctgctgattatccttatactgttcgcttggtaagtcaggtactcgag
tctaatggttcttcttctatggctacaacttgtgctggtactcttgctttgatggatgct
ggtgtgcctatcaagaaacctgtttctggtattgctatgggacttattaagaacccaggt
gaggataagtatgctatattgagtgatattcttggtgatgaagaccacttgggtgatatg
gacttcaagaccacaggtacacgtgatggtttgactgctactcagatggatatcaagtgt
gatggtctttctttcgaaatcttggaaaaggctttgatgcaggctaaggctggtcgtgag
catatcttgaatgagatgatgaagactatctctgaaccacgtgcagagcttaaaccacag
gttcctcgtatcgaggtgtttgatattcctaaggaattcattggtgctgttatcggtcct
ggtggtaagattatccagcagatgcaggaagagacgggcgcaactattactatcgaggag
accgagggtaaaggtcacgttcaagtttctgctcctaacaaggagagtatcgatgctgcg
ctattgaagattagagcaattgttgctgttcctgaggtaggtgaagtatacgaaggtact
gttcgtagcattatgccttatggctgcttcgtagagattcttcctggtaaggatggttta
cttcatatttcagagatcgattggaaacgtcttgaaactgttgaagaggcaggtttgaag
gaaggtgataagattcaagttaaattgatggaaatcgatccaaagacaggtaagtataag
ttgtctcgtcgtgctcttcttgaaaagccagaagggtatgtagagcgtgagcgtcgtcct
cgtcgtggtggcgatcgtcgtaacaacggcggtgagcatcgtcgcttcgagcatcaggat
aacaatgatgcacagggtgctgaataa
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