Sphingobium fuliginis KK22: H5V43_00485
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Entry
H5V43_00485 CDS
T06985
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sbar
Sphingobium fuliginis KK22
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_00485
Enzymes [BR:
sbar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
H5V43_00485
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
H5V43_00485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
QOT71704
UniProt:
A0A292ZIH2
LinkDB
All DBs
Position
1:complement(105813..107354)
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AA seq
513 aa
AA seq
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MAAPLLIPILGDQLTPGIASLRNADPANSILLMMEVADETTYVRHHKAKIAFILSAMRHH
ADRLRALGWTVDYVKLDQPENSGSFTGEVARAIERHRPSAIHVTEGGEWRVRAMLEEWEG
RFGIPVTIHEDDRFLCSHAEFDAWAAARQQLRMEFFYRDMRRRTGLLLTEEGEPEGGQWN
FDAENRKPPPRRDLLMPQPLRFRPDPITRDVLALVAARFSDHIGSLDHFHFAVTHEDAQR
QQDHFLDQALPRFGDYQDAMLTDEPFLWHSVLSPYINAGLLDPLSLCRAVEGRYRAGRVP
LNAAEGFIRQVIGWREYVRGVYWHEGPGYGRRNALDATRDLPGFYWTGKTDMHCMARAVG
QTIDHAYAHHIQRLMITGNFALLAGIDPVQVHVWYLEVYADAYEWVEMPNTIGMALFADG
GLLGSKPYAAGGAYINRMSDYCGRCRYDVKQRLGEDACPFNALYWDFLARNERKLARNPR
LAMPYRNWNRMSVEDRAALRKQAARFLDGLGNG
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccccctcctcatcccgatcctcggcgaccagctgacgcccggcatcgcgtcg
ctccggaacgccgacccggcaaacagcatcctgctgatgatggaggtggcggacgaaacc
acctatgtccgccatcacaaggccaagatcgccttcatcctctccgccatgcgccatcat
gccgatcggttgagggcgctcggatggacggtcgactatgtgaagctcgaccagccggaa
aacagcggcagcttcaccggggaggtcgcccgcgccatcgaacgccaccgtccctccgcc
atccacgtcacggagggcggcgaatggcgcgtccgcgcgatgctggaggaatgggaaggc
cgcttcggcatccccgtcaccatccatgaggatgaccgcttcctctgctcccatgccgaa
ttcgatgcctgggcggcggcgcgccagcagctcaggatggaatttttctaccgcgacatg
cgccgcaggaccgggctgttgctgacggaagagggcgaacccgaaggcggccagtggaat
ttcgacgcggaaaaccgaaaaccgccgccccggcgcgacctgttgatgccgcagccgctc
cgcttccgccccgacccgatcacgcgggatgtgctggcgctggtcgcggcgcgtttttca
gaccatatcggttcgctcgaccatttccacttcgccgtcacgcatgaggatgcgcaacgc
cagcaggaccatttcctcgaccaggccctgccccgcttcggggactatcaggacgcgatg
ctgaccgatgagccattcctctggcactcggtcctttcgccctatatcaacgccggactg
ctcgacccgctgtcgctctgccgggcggtggaggggcgataccgcgccggcagggtcccg
ctcaacgcggcggagggcttcatccggcaggtcatcggctggcgcgaatatgtgcgcggg
gtctattggcacgaaggccccggctatggccgccgcaacgcgctggatgcgacgcgcgac
ctgcccggcttctactggacgggcaagaccgacatgcactgcatggcccgggcggtcggc
cagaccatcgaccacgcttacgcccatcatatccagcgactgatgatcaccggcaatttc
gccctgctcgccgggatcgaccccgtgcaggtgcatgtctggtatctggaggtctatgcc
gacgcctatgaatgggtggaaatgcccaacaccattggcatggcgctgttcgcggacggc
ggcctgctggggtcgaaaccctatgcggcgggcggcgcctatatcaaccgcatgtcggat
tattgcggccggtgccgctatgacgtgaagcagcgccttggcgaggacgcctgccccttc
aacgccctctactgggactttctggcccgcaacgagcggaagctggcgcgcaatccgcgc
ctcgccatgccctatcgcaactggaaccggatgagcgtggaggaccgcgccgccctcagg
aaacaggcggcgcggttcctcgacggattgggcaacggttag
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