Sphingobium fuliginis KK22: H5V43_03115
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Entry
H5V43_03115 CDS
T06985
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H5V43_03115 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbar03019
]
H5V43_03115 (pnp)
03016 Transfer RNA biogenesis [BR:
sbar03016
]
H5V43_03115 (pnp)
Enzymes [BR:
sbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
H5V43_03115 (pnp)
Messenger RNA biogenesis [BR:
sbar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
H5V43_03115 (pnp)
Transfer RNA biogenesis [BR:
sbar03016
]
Prokaryotic type
tRNA degradation factors
H5V43_03115 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
BioW
S1_2
OB_RRP5_4th
OB_PDCD11
Motif
Other DBs
NCBI-ProteinID:
QOT72175
UniProt:
A0A292ZFW9
LinkDB
All DBs
Position
1:646887..649214
Genome browser
AA seq
775 aa
AA seq
DB search
MFDVKKVSIELGGKTLTLETGRIARQADAAVLATYGETVVLCAVTAAKSVKEGQDFFPLT
VHYQEKYSAAGRIPGGFFKRERGATEKETLVSRLIDRPVRPLFPEGFYNEINVIAQVLSF
DGESEPDIVAMIAASAALTLSGVPFLGPIGAARVGYKDGEYQLNPSLDEVKTGELDLVVA
ATGNAVMMVESEAKELSEDVMLGAVLFAHEASKKVVNAIIDLAEKAAKDPWDVAKGEDLD
DLKKKLKKLIGKDITAAYKLTDKSARSNALNEARAKAKAYFTEEGLDAQTVMAGIKLTKK
LEAEIVRGAILKDGKRIDGRTTTQIRPIEAMVGFLPRTHGSALFTRGETQSICTTTLGTK
DAEQMIDGLTGVHYESFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPSKE
EFPYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLKRPVSGIAMGLILEGSKFAVLS
DILGDEDHLGDMDFKVAGTEAGITTMQMDIKVAGITQEIFEVALRQAKEGRAHILGEMSK
ALSSTRTELSAHAPRIETIQIDKAKIRDVIGTGGKVIREIVAETGAKVDIDDEGIIKISS
SDIAQIEAAKKWILGIVEEAEVGKIYTGKVVNIVDFGAFVNFMGGKDGLVHVSEMKNERV
EKPTDVVSEGQEVKVKVLEIDPRGKVRLSMRVVDQETGEELEDTRPPREPRGDRGGDREG
GRGDRNRRDRGGDRGDRGGRGGDRGPRRDRGPRGEGRGGDDDGSNAGLPDFLTQD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgttcgatgtaaagaaggtatcaatcgagctgggcggcaagaccctcacgctcgaaacc
ggccgcattgcgcgtcaggccgacgccgccgtgctggcgacctatggcgaaaccgtggtg
ctgtgcgccgtgaccgccgccaagtcggtgaaggaaggacaggacttcttcccgctgacc
gtccattatcaggaaaaatattcggccgccggtcgcatcccgggcggcttcttcaagcgt
gaacgcggcgccacggaaaaggaaacgctggtttcccgcctgatcgaccgcccggtccgc
ccgctcttccccgaaggtttctacaatgaaatcaacgtcatcgctcaggttctgagcttc
gacggcgaaagcgagcccgacattgtggcgatgatcgccgcttcggctgcgctgaccctg
tcgggcgtgcctttcctgggtccgatcggcgccgcccgcgtcggctacaaggatggcgag
tatcagctgaacccgtcgctggacgaagtgaagaccggcgaactcgacctggtcgtcgcc
gccaccggcaacgcggtgatgatggtcgaatcggaagccaaggaactgtcggaagacgtc
atgctcggcgccgtcctcttcgcgcatgaagcgtcgaagaaggtcgtcaacgcgatcatc
gacctcgccgaaaaggccgcgaaggacccgtgggacgtcgccaagggcgaagatctggat
gacctcaagaagaagctcaagaagctgatcggcaaggacatcacggccgcctacaagctg
accgacaagtcggcccgctccaacgcgctcaatgaagcccgcgccaaggctaaggcttat
ttcacggaggaaggcctcgacgcccagaccgtcatggccggcatcaagctgaccaagaag
ctggaagccgaaatcgtccgcggcgccatcctgaaggacggcaagcgtatcgacggccgc
accacgacgcagattcgccccatcgaggcgatggtgggcttcctgccgcgcacccatggt
tcggcgctgttcacccgtggggaaacgcagtccatctgcaccaccacgctgggcaccaag
gatgcggagcagatgatcgacggcctgaccggcgttcattatgaaagcttcatgctgcac
tataacttcccgccctattcggtcggtgaagtcggccgcttcggcgcgccgggccgccgc
gaagtcggccatggcaagctggcatggcgcgccctgcacccggtcctgcccagcaaggaa
gagtttccctacaccatccgcgtgctgagcgacatcaccgagtccaacggctcgtcctcg
atggcgacggtctgcggtggttcgctgtccatgatggacgcgggcgttccgctgaagcgt
ccggtgtcgggcatcgccatgggcctgatcctggaaggctccaaattcgctgtcctcagc
gacattctgggcgacgaggatcaccttggcgacatggacttcaaggtggcgggcacggaa
gcgggcatcaccaccatgcagatggacatcaaggtcgccggcatcacgcaggaaatcttc
gaagtcgcgctgcgtcaggcgaaggaaggccgcgcccatatcctgggtgaaatgagcaag
gccctgtcctcgacccgcaccgaactgtcggctcatgctccgcgcatcgaaacgatccag
atcgacaaggcgaagatccgcgacgtcatcggcaccggcggcaaggtcatccgtgagatc
gtcgcggaaaccggcgccaaggtcgacatcgacgacgagggcatcatcaagatcagctcg
tccgacatcgcccagatcgaagccgccaagaagtggattctcggcattgtcgaggaagcg
gaagtcggcaagatctacaccggcaaggtcgtcaacatcgtcgacttcggcgccttcgtg
aacttcatgggcggcaaggacggtctcgtccacgtctccgaaatgaagaatgagcgcgtc
gaaaagccgaccgacgtcgtgtcggaagggcaggaagtgaaggttaaggttctcgaaatc
gacccgcgcggcaaggttcgcctgtccatgcgcgtcgtcgatcaggaaaccggagaggaa
ctggaagacacccgtccgccccgcgaacccaggggggatcggggcggcgaccgtgaaggc
ggccgtggcgaccgcaatcgccgtgatcgtggcggtgaccggggcgaccgtggcggccgc
ggcggcgatcgcggtccgcgccgcgaccgcggtccgcgcggcgaaggcaggggcggcgat
gacgacggctccaacgccggtctgcccgacttcctgacccaggactga
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