Sphingobium fuliginis KK22: H5V43_03250
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Entry
H5V43_03250 CDS
T06985
Name
(GenBank) BapA prefix-like domain-containing protein
KO
K20276
large repetitive protein
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H5V43_03250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Big_6
HemolysinCabind
Big_3_5
Big_3_3
bMG3
DUF6209
DUF6802
Mo-co_dimer
Motif
Other DBs
NCBI-ProteinID:
QOT72199
UniProt:
A0A7M2GJR4
LinkDB
All DBs
Position
1:684559..690117
Genome browser
AA seq
1852 aa
AA seq
DB search
MDKRIDITVRQTGATQTHVVQQQNAVIQAQGGSAIKVTAARSEVTAMRREGDDLILHFAD
GTAVRLEGYFNCPPGDIADLIFLEPGNGQQWLTDLGSEACYLPTDTTTEALSYSFAPAGA
AGGLSGGLLAGLGAVAAGIGVAAAAGGGGGGGGGSDGGTAVDSTPPAAPTVAPTNGRSLS
GSAEAGSTVRIDVNGDGSVDATATADNAGRWSYTPATPIGDGVTVRVTAVDAAGNASPST
SVTVDAAAPPAPVINPSNGTALGGTAEAGATIGLDLDGDGDVDATTTADASGNWNYTPST
PIPDGTTVTAVATDAVGNSSAPASIDIDAVPPAAPLVDPSNGTELTGTAEPGATVGIDSD
GDGTIDTTVPVDDQGNWSHVPATPIADGTTVEVVATDPSGNTSSPATVVVDATAPAIPVV
GNVVDDVGTTTGPVANGGSTDDTTPTLSGSGVEANAIVSVYDGGALLGTVVADTSGNWNF
TPTTPLLEGTHSFTVTATDGTGNVSAASAAYVLTVDTSAPAAPLLAPTDGTTVSGSAEGG
ATIDLDTDGDGLSDATTVADASGDWSITLASPLANGTVISAIATDAAGNSSTPDTVTVDT
GLDTTPPAIPTIGAVADDVGAILGAVANGGSTDDMTPTLSGTGVEANAIVSVYDGGTLLG
TAAVDGSGNWNFTPTAPLGEGTHSLTVTATDAAGNVSAASAAYVLTVDTSAPATPVLAPT
DGTTISGTAEAGATIALDTDGDGISDETTTVDASGDWSITPASPLANGTVVTAIAIDAAG
NSSTPDTVTADTGLDTTPPAIPGIGGVADDVGAILGPIANGGSTDDTVPTLSGTGVEANA
IVSVYDGSTLLGTTSADGSGNWSFAPTAPLGEGTHSFTVTATDAAGNVSAASAAYVLTVD
TSAPAAPILAPSDGTTLSGIAEAGAIIDLDTDGDGVFDETTTADASGDWSITLASPLANG
TVVNAIATDAAGNSSLAGAVTVNTGLDTTPPAVPSIAAVADDAGSILGPVANGGITDDAT
PTLSGLGVEANAIISVYDGSTLLGTATSDALGNWSFTPTTPLGAGSHSFTVTATDAAGNE
SAASAAYALTVDTVASIPTITGMTDNAGSVLGGVISGGTTDDTTPTLSGTGAEANASISI
YDGNILLGTATADASGNWSFTPTTPLGEGLHSFTATATDAAGNVSLASAAYAVTIDLTVP
PVPTITGASDNAGSILGGVISGGSTDDTTPTLSGTGAEANGTVSVYDGSTLLGTATADVS
GNWNFTPTAPLGEGPHSFTAVGVDAAGNASIASTPYALTIDLTVPAAPTITGVSDNVGSV
LGAVALGGATDDTTPTISGTGAEANANVSVYDGGTLLGTATADGSGNWNFTPTTPLGNGP
HSFTAVVTDAVGNAGLASAPYAIAIDTVAPTATVAITALRDDTQVVGDWATDDTSPTITG
TLSAPLAGGERVEVSLDGGATWTQAATSGTSWSYGPGTLGAGGHVVNVRVVDAVGNVGST
AAQPITITNVNDAPIVLASDSSLLGLVSAEALGLLDIGSQAFVAIDPENSLQSVVLDFTP
LLTVGTQVFTVSQDLATELGLAVNVNNQFVTVLGTPVSTISSTMTITALDGGPIDNMAIN
ELLRAVHFNSPLGLNVNLLSGISITATDTAGASRTDNAASLLDANLLNTLLGGSSDPTIL
EGTAGVNILTGTAANEHLYGYGGADILQGGGGNDILRGGAGADTLDGGTGNDILLFDAAD
TLIDGGAGADALLVRGDSSVSLNLDAATNIRNMERIDLGVGDTGHSLTLTEAGIIQATDA
NRQLIITGENNDSVTMTGAVHVGQALVDNHAYEQYSLGTTTVLIEDPVLVVV
NT seq
5559 nt
NT seq
+upstream
nt +downstream
nt
atggacaagcgcatcgacatcaccgttcgtcagacgggtgcgacccaaacccacgtcgtt
cagcaacaaaatgccgtgatccaggcccagggcggctcagcgatcaaggtgacggctgcg
cgcagcgaggtgacggcgatgcggcgtgaaggggatgatctgatcctgcattttgccgac
ggtacggcggtccggctggagggttatttcaattgtccgccgggagacattgccgacctt
attttcctcgaaccaggcaatgggcagcagtggctgaccgatctgggcagcgaagcctgc
tatctgcccaccgacacgaccaccgaagccctgagctattccttcgcccccgcaggcgct
gcggggggcctgagcggcggcctgctggcgggattgggggcggtggccgccggcatcggc
gtcgcggctgctgctggcggcggcggtggtggtgggggtgggtcggatggcgggacggct
gtggatagcacgcccccggcagcgccgaccgtggcgccgacaaatggccgtagcttgtcg
ggctctgcggaagcgggttcgacggtgcgcatcgacgtcaatggcgacggctcggtcgat
gcgacggctaccgctgacaatgccggccggtggagctatacgccggccacgcccatcggc
gatggtgtgacggtgcgggttacggcagtggatgcggcgggcaatgcgtcgccatcgacc
agcgtgacggtggacgcggccgctccgccggcgccggtgatcaatcccagcaacggcacg
gcgctcggcggtacggctgaggcaggggccacgatcgggctggatctggatggcgacggc
gacgtcgatgcgacgaccacggccgatgcgtccggtaactggaactatacgccttcgacg
ccgattccagatgggacgacggtgacggccgttgcgaccgatgcggtgggaaacagctcc
gcgcccgccagcatcgacattgacgccgtgccccccgccgctccgctcgtcgatccgagc
aacgggaccgaattgaccggaacggcggagcccggcgcgactgtcggcatcgatagcgat
ggcgacggcactatcgacacgacggttcctgtcgatgaccaaggcaattggagccatgtg
ccggcgacacccattgccgacggcacgacggtggaggtcgttgcgaccgatccgtccggc
aacacatcgtcccctgcgacggtcgtggtcgacgccactgcgcctgcgatccccgtggtg
ggcaatgtagtcgacgatgtcggcacgacgaccggccctgtcgccaatgggggcagcacg
gatgatacgacgccgacgctgtcgggaagcggagtagaggcgaacgccatcgtctctgtc
tatgacggcggcgccttgcttgggacagtcgttgcagacacctccggcaactggaacttc
acgcccaccacgccactgttggaagggacgcacagcttcaccgtcacggcgacggatggg
acgggcaatgtcagcgcggcgtccgccgcctatgtcctgaccgtcgacaccagcgccccg
gctgcgccgctgctcgcgcctaccgacgggacgacggtttcgggctcggcggagggcggg
gcgaccatcgatctcgacacggatggcgacggcctgtccgatgcgacgacggtcgcggac
gcatcgggtgactggagcatcaccttggcttcgccgctggcgaacggtacggtgatcagc
gccatcgccacggatgcggctggcaacagctccacgcccgatacggtgaccgtcgatacc
ggactcgacactacgccccccgccattccgaccatcggcgccgtagccgacgatgtcggc
gcgatccttggcgctgtcgccaatggcggcagcacggatgacatgacgccaacgttgtcg
ggaaccggcgtcgaagcgaatgccatcgtctccgtttacgacggcggcacgctgctgggc
acggccgcggtggacggttcgggcaactggaacttcacccccaccgcgccgctgggtgag
ggaacgcatagcctgaccgtcacagcaaccgacgcggcgggcaatgtcagcgcggcatcg
gccgcctatgtcctgaccgtcgataccagtgctccggcaacgcctgtgcttgccccgacc
gacggcacgacaatatcgggcactgcggaggctggagcgaccatcgctctggataccgac
ggtgacggcatatccgacgagacgacgacggtggacgcatcgggcgattggagcattacg
ccggcatcgccgctcgcaaatggaacggtggtgaccgccatcgctatcgatgcggcaggc
aacagctccacccccgatacggtgaccgccgatacaggtctggatacgactcctccagcc
attcccggaattggcggcgtagccgatgatgtcggcgcgatcctgggccccatcgccaat
ggcggcagcacggatgacacggttccgaccctctcgggaacgggcgtagaggcgaatgcc
attgtctccgtctacgacggcagcaccttgctgggcacgacgagcgcggacggttcgggc
aactggagcttcgcgcccaccgcgccgctgggcgaggggacgcacagcttcaccgtcacg
gcgaccgacgcggcaggcaatgtcagcgcggcgtctgccgcctatgtgctgaccgtcgac
accagcgctccggccgcgccgattctggctccgtccgacggaaccacgctatcgggtatc
gcggaagccggcgcgatcatcgacctcgacaccgatggcgatggcgtgttcgatgagacc
acgaccgcggacgcctcgggcgattggagcatcaccctggcttccccgctggcgaatgga
acggtcgtcaacgcgattgcgaccgatgctgcgggcaatagctcgcttgccggtgcagtg
accgtcaataccggcctcgacaccacgccgcctgcggtgccgtcgatagcggcggtggcc
gacgatgccgggtcgatcctcggccctgtcgccaatggcgggatcacggacgatgcgacg
cctaccctgtcgggactcggggtcgaggcgaatgccattatttcggtctatgacggcagc
accctgctgggcacggcgacgtcggacgctttgggcaattggagcttcacgccgaccacg
ccgctgggtgcgggttcgcacagcttcaccgtcacggccacggatgcggcggggaatgag
agcgcggcttcagcggcctatgccttgaccgtcgataccgtcgcctccattccgacgatc
accggcatgaccgacaatgcgggttcggtccttggcggcgtgatctcgggcggaacgact
gacgacaccacgcccactctctccggaaccggcgcagaggcgaacgcaagcatctcgatc
tacgacggcaatatcctgctgggtacggcgacggcggatgcttcgggcaattggagcttc
acgccgaccacgccgctgggcgagggcttgcacagcttcaccgccacggcgaccgatgcg
gcgggcaatgtcagcctcgcttcggcggcctatgcggtcacgatagacctgaccgtgccg
cccgtgccgacgatcaccggggccagcgacaatgccggttcgatcctaggcggcgtgatt
tcgggagggtcgaccgacgacacgacgccgaccctttccggaaccggtgcggaagcgaac
gggaccgtttcggtctatgacggcagcaccctgctgggcacggcgacggcggacgtttcg
ggcaactggaatttcacgcccaccgctccgctgggcgaggggccgcacagcttcaccgcc
gttggcgtcgacgcagcaggcaatgccagcattgcctcgacgccttatgcgctgacgata
gacctcaccgtcccggccgcgccgacgattaccggcgtcagcgacaatgtgggctcggtg
ctgggcgcggtggctctgggaggggcgacggacgacacgacgccgaccatttcgggaaca
ggcgcggaggcgaacgccaacgtttccgtctatgatggcggcacgctgctgggcaccgca
acggcggatggatcgggcaactggaattttacgccgacaacgcccttgggcaatggaccg
cacagcttcaccgccgtcgtgacggatgccgtgggcaatgcgggcctggcgtcggcgccc
tatgccatagccatcgataccgtcgccccgaccgccacggtcgcgatcacggccctgcgc
gacgacacgcaggtggtgggcgactgggccaccgacgatacgtccccgaccatcacaggc
acgctgagcgcaccgctggccggcggggagcgggtcgaggtcagcctggatggcggcgcc
acctggacgcaggcggcgaccagcggcaccagctggtcctacggtcccggcacgctcggc
gccggcggccatgtggtgaacgtgcgcgtcgtggatgcggtcggtaatgtgggctccacg
gccgcccagccgatcaccatcacgaacgtcaacgacgcgcccatcgtcctggcatcggac
agcagcctgctggggcttgtcagtgcggaagccctgggcctgctcgacatcggcagccag
gccttcgtggcgatcgatccggagaacagcctgcaaagcgtcgtgctggactttacgccc
ctgctgaccgtcggcacgcaggtcttcaccgtgtcgcaggatctggcgaccgaactcggc
cttgcggtcaacgtcaacaaccagttcgtgaccgtgctggggacgcccgtctccaccatc
tcctcgaccatgactataacggcgctggatggcgggccgatcgacaatatggccatcaac
gaattgctgagggcggtgcatttcaattcaccgcttggtctcaacgtgaacctgctgtca
ggcatcagcatcacggcgaccgatacggccggcgcgtcgcggacggacaatgcggccagt
ctgctcgacgccaatctgctcaacaccctgcttggcggcagcagcgatccgaccattttg
gagggcacggccggcgtcaacatattgaccggcaccgccgccaatgagcatctctacggc
tatggcggcgccgatattctccagggcggcggcggcaacgacatattgcgtggcggcgcc
ggcgccgacacattggacggcggcaccgggaacgacatattgctgttcgacgcggccgat
acgctgatcgacggcggggcgggcgctgatgcgctgctcgtccgcggcgacagcagcgtg
tcgctgaacctcgatgcggcgaccaatatccgcaatatggaacggatcgacctgggcgtg
ggcgacaccggacacagcctcaccttgacggaggccggcatcatccaggcgacggatgcg
aaccggcaactcatcatcacgggcgagaataacgacagcgtgaccatgaccggtgcggtc
catgtcggccaggcgctggtcgataatcacgcctatgagcaatatagtctgggaaccacg
accgtgctcatcgaagatcccgtgctggtggtggtttga
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