Sphingobium fuliginis KK22: H5V43_05340
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Entry
H5V43_05340 CDS
T06985
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sbar
Sphingobium fuliginis KK22
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbar03032
]
H5V43_05340
03036 Chromosome and associated proteins [BR:
sbar03036
]
H5V43_05340
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_05340
DNA replication proteins [BR:
sbar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H5V43_05340
Chromosome and associated proteins [BR:
sbar03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
H5V43_05340
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
H5V43_05340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_bac_2
Utp8_C
Motif
Other DBs
NCBI-ProteinID:
QOT72555
UniProt:
A0A292ZEF1
LinkDB
All DBs
Position
1:complement(1137632..1137922)
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AA seq
96 aa
AA seq
DB search
MIRSELIQKLAEENPNLNLQEVERIVDLFFKEIVDRLSSGGRVELRGFGAFTTRARDART
GRNPRTGEQVPVDAKRVPYFKPGKEMRERLNGKAAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgatacgctcggaactgattcagaaattggctgaggaaaatccaaacctcaacctccag
gaagtggaaaggatcgtcgatcttttcttcaaggaaatagtcgaccgcctctccagcggc
gggcgagtggaacttcggggcttcggcgcctttacgacacgggcgcgcgacgcgcgtacc
ggccgcaatccgcgcaccggtgagcaggtgccggtggacgccaagcgggttccctatttc
aaacccggaaaggaaatgcgggaacggctgaacggcaaagctgcccactga
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