Sphingobium fuliginis KK22: H5V43_05380
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Entry
H5V43_05380 CDS
T06985
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar03420
Nucleotide excision repair
sbar03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H5V43_05380
03430 Mismatch repair
H5V43_05380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_05380
Enzymes [BR:
sbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H5V43_05380
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H5V43_05380
MMR (mismatch excision repair)
Other MMR factors
H5V43_05380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QOT72560
UniProt:
A0A292Z9S5
LinkDB
All DBs
Position
1:complement(1143988..1146264)
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AA seq
758 aa
AA seq
DB search
MTLPAPSPDDPAYLQGLNEPQREAVLTTEGPVLVLAGAGTGKTAALTARLAHLIATRRAY
PSEILAVTFTNKAAREMRERVGRMIGPAVEGMPWLGTFHAIAAKMLRRHAELVGLQSNFT
ILDTDDQLRLMKQLIQAEGIDEKRWPARQLAGLIDQWKNKGLTPEEIGAGESEGYANGKG
QKLYAAYQARLRDVNACDFGDLLLHVLTILKRHRDVLESYQQRFRYIMVDEYQDTNSSQY
LWLRLLAQQRKNICCVGDDDQSIYSWRGAEVANILRFEKDFPGAKIVRLEQNYRSTPHIL
GAASGVIAENGNRLGKTLWTDIDVGEKVRIIGVWDGPEEARRVGDEIESIERSGQSLEGV
AILVRAQHQTREFEDRFIQIGLPYRIVGGFRFYERAEIRDALAYLRLVNQPADDLAFERI
VNVPKRGLGDKAVEKLHRLARAEGVPLALAAARILDTDEMTPQARRSLGAFIGDLARWRD
RAVQLPHAELARQILDESGYTAMLQAERTAESAGRLENLNELTRAMEEYETLGAFLEHVS
LVMDNEAQQDERKVTIMTIHAAKGLEFDTVFLAGWEEGIFPSQRALDEGGLNSLEEERRL
AYVAITRARKSCVILHAANRRIYGQWTSSIPSRFVGELPPEHVEEESSMSGGASLWRANW
SERADPFANVQRGTGRGPGWQRAQQSGQFTREPARIVEARASAVSLGNKGRDDMSVGLRV
FHQKFGYGTVAEIEGNKLEIDFETAGRKRVMDSFVQPA
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgactctgcccgccccctcccccgacgatcccgcctatctccaggggctgaacgaaccc
cagcgggaggccgtgctcacgaccgaggggccggtgctggtgcttgcaggcgccggcacg
ggcaagacggcggcgctcaccgctcgcctcgcccatctgatcgccacccgtcgggcctat
ccttcggaaatcctcgcagtcaccttcaccaacaaggcggcgcgcgaaatgcgggagcgc
gtcggccggatgatcggccccgccgtcgaaggcatgccctggctgggcaccttccacgcc
atcgccgcgaagatgctgcgccgccacgccgaactggtggggctgcaatccaatttcacc
atcctcgacacggacgatcagcttcgcctgatgaagcagctcatccaggcggagggaatc
gacgagaagcgctggcccgcacgccagctcgccggcctcatcgaccagtggaagaacaag
gggctgacgccggaggaaatcggcgccggcgagagcgagggctatgccaacggaaagggg
cagaagctctacgccgcttatcaggcgcgtcttcgggacgtgaatgcctgcgatttcggg
gacttgctgctgcatgttctgacgatcctgaaacgccatcgggacgtgctggaaagctat
cagcagcgcttccgctatatcatggtggacgaatatcaggacaccaacagcagccagtat
ctgtggctgcgcctgctcgcccagcagcgcaagaacatctgctgcgtgggagacgacgac
cagtctatctattcatggcggggggcggaagtcgccaatatcctgcggttcgaaaaggat
tttcccggcgcgaagatcgtccggctggaacagaattatcgctcgacaccccatatattg
ggcgctgcgtcaggagtgatcgcggaaaatggcaatcgcctgggcaagacgctctggacc
gacatcgacgtgggcgagaaggtccgcatcatcggcgtctgggacgggccggaggaagcg
cggcgcgtgggcgacgagatcgaatcgatcgaacgcagcggccaatcgctggagggggtc
gccatcctcgtccgggcccagcaccagacgcgcgagttcgaagaccgcttcatccagatc
ggcctgccttatcgcatcgtgggcggcttccgcttctatgaacgcgccgagattcgggac
gctctcgcctatcttcgcctggtcaatcagcccgccgatgacctggcgttcgaacggatc
gtcaacgtccccaagcgcggcctgggcgacaaggccgtggaaaagctgcatcggcttgcc
cgggcggagggcgttccgcttgccctcgccgccgcgcgaatcctcgacacggacgagatg
acgccgcaggcccgccgcagcctcggcgccttcatcggcgatctcgcccgctggcgggac
cgcgcggtgcaacttccccatgccgaactggcccgacagatattggacgaaagcggctac
accgccatgctccaggccgaacgcaccgccgaaagcgcgggaaggctggagaacctcaac
gaactgacccgcgccatggaggaatatgagacgctgggcgcattcctggagcatgtaagc
ctcgtcatggacaatgaggcgcaacaggacgagcgcaaggtcacgatcatgaccatccac
gccgccaaggggctggagttcgacacggtcttcctcgcggggtgggaagaaggcatcttc
ccctcccagcgcgcgctcgacgaaggcggcctcaacagcctggaggaggaacgccgcctc
gcctatgtcgcgatcacgcgggcgaggaagtcctgcgtcatcctgcacgccgccaaccgc
cgcatctatggccagtggaccagctccatcccttcgcgcttcgtcggggaattgcctccc
gaacatgtggaggaggaaagcagcatgtccggcggcgcctcgctctggcgcgccaactgg
tcggagcgggccgatcccttcgccaatgtccagcgcggcaccggtcgcggccccgggtgg
cagcgcgcccaacagagcggacagttcacccgcgaacccgcaaggatcgtggaggcgcgc
gcatcagcggtctcgctcggcaacaaggggcgggatgacatgagcgtcggcctgcgcgtc
ttccaccagaaattcggctacggcacggtggcggagatcgaaggcaacaagctggagatc
gatttcgaaacggcgggtcggaagcgggtgatggacagcttcgtccagcctgcctag
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