Sphingobium fuliginis KK22: H5V43_05925
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Entry
H5V43_05925 CDS
T06985
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sbar
Sphingobium fuliginis KK22
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbar03032
]
H5V43_05925 (topA)
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_05925 (topA)
Enzymes [BR:
sbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H5V43_05925 (topA)
DNA replication proteins [BR:
sbar03032
]
Prokaryotic type
DNA Topoisomerases
H5V43_05925 (topA)
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H5V43_05925 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
DUF7343
Poly_export
Motif
Other DBs
NCBI-ProteinID:
QOT72657
LinkDB
All DBs
Position
1:complement(1266422..1268974)
Genome browser
AA seq
850 aa
AA seq
DB search
MQLVIVESPAKAKTIEKYLGGDFHVLASYGHIRDLPPKDGSVDPDNGFAMSWENYGDKGK
QLKAIADEAKKATRLILATDPDREGEAISWHVQEVLRAKKALPQKVDRVTFNAITKQAVT
DAMAQPRALDEDLIDAYRARRALDYLVGFTLSPVLWRKLPGAKSAGRVQSVALRLVVDRE
REIESFVPQEYWSVAAEMEQGGQGFVARLVRWRGEKIERLTIGREGDAMAAKADVEAGRF
TVEKVETKPVSRNPPPPFTTSTLQQEAARKLGFSASHTMRIAQQLYEDGAITYMRTDGVQ
MDGSAISAARKAIAERYDGGYLPEKPRQYQTKAKNAQEAHEAIRPTEFSRDKVGSGDHAR
LYDLIFKRALASQMASARLERTTVDLVDATGQHGLRATGQVVIFPGFLALYEEGRDDAED
DDSRLLPRLGVGDAPAKKKVTAEQHFTQPPPRYSEASLVKKLEELGIGRPSTYASTLQVL
KDRDYVRIEKNRFFAEESGRLVTAFLERFFERYVSYDFTAGLEEELDDISGGRAQWQAVL
EAFWRDFKPKTAEVMEQKPSDITSELDKFLEPMLFPPKADGSNPRACPMCGDGQLSLRGG
RFGAFIACSNYPECKYTRKFGQPGGDKDGEDKGPEVLGQHPETGQDIVRKSGRFGPYIEM
GEGKEAKRGSIPKDLPDGELTLDWAVKLLSLPREIGLHPETGKPIVANIGRFGPYLLHDG
KYGRLSSTAEIFEVGMNSAVAKLADAANKGGRGSSSREPLKVLGKHPRTEAEIKLMAGRY
GPYVTDGTTNATLPKTIEQDALTLEEAAQLIDARAAAAPAKKGKKAPAKKAGAKKPAAKK
APAKKKVAAE
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgtcatcgttgaatcgccggccaaggcgaagaccatcgaaaaatatctgggc
ggcgatttccatgtgctggccagctatgggcatatccgcgacctgccgcccaaggacggg
tcggtggaccccgacaacggctttgccatgagttgggaaaattatggcgacaagggcaag
cagctcaaggccatagccgacgaagccaagaaggcgacccggctgatcctggcgaccgac
cccgatcgagagggggaggcgataagctggcatgtgcaggaggtgctgcgggcgaagaag
gcgctgccgcagaaggtggaccgcgtgaccttcaacgcgatcaccaagcaggcggtgacc
gacgcgatggcccagccgcgcgcgctggacgaggatctgatcgacgcctatcgggcgcgg
cgggcgctggattatctggtgggcttcaccctgtcgccggtgctgtggcgcaagctgccc
ggcgccaagtcggcggggcgggtgcagtccgtggccttgcggctggtcgtggaccgggag
cgcgagatcgaaagcttcgtgccgcaggaatattggtcggtcgcggccgagatggagcag
ggcggacagggtttcgttgcgcggctggtgcgctggcgcggcgagaagatcgagcggctg
accatcggcagggaaggcgacgccatggccgcgaaggcggatgtggaggccgggcgcttc
accgtcgagaaggtcgagaccaagccggtttcgcgcaaccctccgccgccgttcacgacc
tcgaccttgcagcaggaggcggcgcgcaagctgggcttttcggccagccatacgatgcgg
atcgcgcagcagctctatgaggatggcgcgatcacctatatgcggaccgacggcgtgcag
atggacggcagcgccatctccgccgcgcgcaaggcgatcgcggagcgctatgacggcggc
tatctgcccgaaaagccgcgccagtaccagaccaaggcgaagaatgcgcaggaagcgcat
gaggccattcgtccgaccgagttttcgcgcgacaaggtggggtcgggcgaccatgcgcgg
ctgtacgacctgatcttcaagcgggcgctggcgagccagatggcttcggcgcggctggag
cggacgaccgtcgatctggtcgatgcgaccgggcagcatgggctgcgcgccaccggacag
gtggtgatctttccggggttcctggcgctctatgaggaagggcgcgacgatgcggaagac
gatgattcgaggctgctgccgcgcttgggcgtgggcgacgctcctgccaagaagaaggtg
acggcggagcagcatttcacccagccgccgccgcgctattcggaagcgtcgctggtcaag
aagctggaggaactggggatcgggcggccttccacctatgcctcgactttgcaggtgctg
aaggaccgcgactatgtgcggatcgagaagaaccgcttcttcgcggaggagagcgggcgg
ctggtgacggcctttctggagcgtttcttcgagcggtatgtgtcctacgacttcacggcg
gggctggaggaggagctggacgatatttccggcgggcgggcccagtggcaggcagtgctg
gaagccttctggcgcgacttcaagcccaagaccgccgaggtgatggagcagaagccttcc
gacatcacgtccgagctggacaagtttctggagccgatgctgttcccgcccaaggcggac
gggtccaatccgcgtgcctgcccgatgtgcggcgacgggcaattgtcgctgcgcggcggg
cggttcggggcgttcatcgcctgctccaactatccggagtgcaaatatacgcgcaagttc
gggcagccgggcggtgacaaggatggcgaggacaagggaccggaggtgctgggccagcat
cccgagaccgggcaggacatcgtccggaaatccgggcggttcgggccctatatcgagatg
ggcgagggcaaggaggccaagcgcggctccattcccaaggatttgcccgatggcgagttg
acgctggactgggcggtgaagctgctgagcctgccgcgcgagatcgggctgcatccggag
acggggaagcccatcgtggcgaatatcgggcggttcgggccctatctgctgcatgacggc
aaatatgggcggctgtcctccaccgcggagattttcgaggtggggatgaacagcgccgtg
gccaagctggccgatgcggcgaacaagggcgggcgtgggtcttcgtcgcgggagccgctg
aaggtgctgggcaagcatccgcgcaccgaagcggagatcaagctgatggcggggcgctat
ggtccctatgtgaccgatggcacgaccaatgcgacgctgcccaagaccatcgagcaggat
gccctgacgctggaggaggctgcgcaactgatcgatgcgcgggctgcggcggcgcctgcg
aagaaggggaagaaggcgccggcgaaaaaagctggagctaagaagcctgccgccaagaag
gcgcctgcgaagaagaaggtagcggcggagtaa
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