Sphingobium fuliginis KK22: H5V43_06050
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Entry
H5V43_06050 CDS
T06985
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar03030
DNA replication
sbar03430
Mismatch repair
sbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H5V43_06050 (dnaE)
03430 Mismatch repair
H5V43_06050 (dnaE)
03440 Homologous recombination
H5V43_06050 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbar03032
]
H5V43_06050 (dnaE)
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_06050 (dnaE)
Enzymes [BR:
sbar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H5V43_06050 (dnaE)
DNA replication proteins [BR:
sbar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H5V43_06050 (dnaE)
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H5V43_06050 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
tRNA_anti-codon
COE1_HLH
Scaffold
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QOT72677
UniProt:
A0A7M2GKA9
LinkDB
All DBs
Position
1:complement(1295196..1298732)
Genome browser
AA seq
1178 aa
AA seq
DB search
MPHAGFVPLRVFSSFTMLEGAIDPKKIAKQARALGFPAAAITDRNGLYGSMAFSDACKGE
GVQPIIGAMIGISRPDRPANAAPVHDWIALYAQDAAGYDNLCALVSMAHLDRPVEEVPHI
SLNMLEGRTDGLIALTAGGEGALARLFAEDQPAAALAYARRLEALFPGRLYIEICRRFDP
IEGKAEPELLDLAYARDLPLVATNPTCFAEPHFHEAHDVMLCIADSAYVETPDRRTSSPD
AWMKPAAEMRRLFEDLPEALANTLVVAQRCAVAAPKRKPILPSLAGDIEGEAKMLREQAT
AGLEARLAKAGITDEEARKPYFGRLRFETDIIIQMGFPGYFLIVADFIKWAKDHDIPVGP
GRGSGAGSVVAWALTITDLDPLQLGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQQ
KYGTDHVAQIITFGKLKARAVLKDTGRVLQMSYGQVDRLAKLVPNHPTDPWTLERSLNGV
AEFRAEYDNDAQVRRLIDYAMKLEGFPRHSSTHAAGVVIGDRPLSQLVPLYRDPRSDMPV
TQFDMKYVEGAGLVKFDFLGLKTLSVLQKAVQLLAGRGVEVDLNSLGWDDPAVYELLQRG
DTVGVFQLESEGMRKTLAAVRPTNFGDIIALVSLYRPGPMDNIPMFGRRKNGQEEIEYPH
ILLKPILEETYGIFVYQEQVMQAAQILAGYSLGDADLLRRAMGKKIKAEMDAQRARFVEG
CANSGIAAGKANELFDLIDKFAGYGFNKSHAAAYALLAYQTAWLKAHYPAEFYAASMAFD
IHLTDKLTVFVDDMRRMGLSCLAPDINRSLADFSVEPVQYEGDDPRLGFAVRYALGGLKG
VGEKAMEQLVAEREVGGPFKSLDDFADRIEPRLLNRRQLESLAAAGAFDGVHADRAGVHA
AAETILSVASSAAEARESGQGGLFGDVETPHADVRIPPHQTWSTADRMAQEKDAFGFYFS
AHPVDRYRHLAEARGAKSYGAICAEPVAEGGRATGVMAAMVEDVRWRETKRGARYAAATF
SDSSGQFQASCFDEDACKAIEDMAREGDCALLMVELDRLPGEETPRVTVRGVEPFRQLAN
SSRMELVVDVSDAAAIGTLAQLLARAKGGRSEVFLRAPVGGGKAARLFLGDDYLIGADQV
DSIATIAGLRIGSFERMEAKADGYRARNRRSGLRLVAG
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatgccggtttcgtcccccttcgcgtcttttcatccttcaccatgctggagggg
gcgatcgaccccaagaagatcgcgaagcaggcgagggctctgggctttcccgccgcagcc
atcaccgaccgtaacggcctgtatggctccatggccttttccgacgcctgcaagggggag
ggggtgcagccgatcatcggcgcgatgatcggcatttcgcgccccgaccgcccggccaat
gcggcgcccgtgcacgactggatcgccctctatgcgcaggatgcggccggctatgacaat
ctctgtgcgctggtatccatggcgcatctcgaccggcccgtcgaagaggtgccgcatatc
agcctaaacatgctggaggggcggaccgatggcctgatcgccttgactgccggaggggaa
ggcgcgctggcgcggctcttcgccgaggatcagcccgctgcggcgctggcctatgccagg
cggctggaagcgctgtttcccggaaggctctatatcgaaatctgccgccgtttcgacccc
atcgaagggaaggcggaaccggaactgctcgaccttgcctatgcccgcgacctgcctctg
gtggcgaccaacccgacctgctttgccgagccgcatttccacgaagcgcatgacgtgatg
ctctgcattgccgacagcgcctatgtcgagacgcccgaccgtcgcaccagttcgccggac
gcctggatgaaaccggcggcggagatgaggcggctgttcgaggatttgcccgaagcgctc
gccaatacgctggtggtcgcccagcgctgcgccgttgccgcccccaagcgcaagcccatc
ctccccagcctggccggcgacatagagggcgaggcgaagatgctgcgcgagcaggcgacg
gcagggctggaagcccggctggccaaggccggcatcaccgacgaggaagcgcgaaagccc
tatttcggccggctgcggttcgaaaccgacatcatcatccagatgggatttccgggctac
ttcctgatcgtggccgacttcatcaaatgggcgaaggatcatgacattccggtggggccg
ggacgtggttcgggcgctggatcggtcgtcgcctgggcgctgacgatcaccgatctggac
ccgctgcaactgggattgctgttcgagcgcttcctgaatccggaacgcgtctccatgccg
gacttcgacatcgacttctgcgaaacgcggcgaggcgaggtgatccgctatgtccagcag
aaatatggcacggaccatgtcgcgcagatcatcaccttcggaaagctgaaggcgcgcgcc
gttctgaaggacacgggccgcgtcctgcagatgagctatgggcaggtcgaccgcctggcc
aagctggtgcccaaccatccgaccgatccctggacgctggaacgctcgctgaacggcgtg
gcggagttcagggcggaatatgacaatgacgcgcaggtcaggcgactgatcgactatgcg
atgaagctggagggctttccgcgccacagctccacccatgcggcgggcgtggtgatcggc
gacaggccgctgtcgcaactggtgccgctctatcgcgatccgcgctccgacatgccggtg
acgcagttcgacatgaaatatgtcgagggcgcggggctggtgaagttcgacttccttggc
ctcaagacgctgtccgtcttgcagaaggcggtgcaactgcttgcgggccggggggtggag
gtcgacctcaattcgctcggctgggacgatccggcggtctatgaactgctccagcggggc
gatacggtcggcgtgttccagttggaatcggagggcatgcgcaagacgctggccgccgtg
cgtccgaccaacttcggggacatcatcgcgctggtgtcgctctaccgccccgggccgatg
gataacatccccatgttcggccgtcgcaagaacggtcaggaagagattgaatatccacat
atattgctgaaaccgatcctggaagagacctatggcatcttcgtctatcaggaacaggtg
atgcaggccgcgcagatattggcgggctattcactgggcgatgccgaccttctgcgccgc
gccatgggcaagaagatcaaggcggagatggatgcgcaacgcgcccgcttcgtcgagggg
tgcgcgaacagcggcatcgcggcgggcaaggcgaacgaactgttcgacttgatcgacaag
ttcgcgggctatggcttcaacaagtcgcacgccgccgcctatgctctgctcgcctatcag
accgcctggctgaaggcgcattatccggcggaattctatgccgcgtccatggccttcgac
atccacctgacggacaagctgaccgtgttcgtggacgacatgcggcgcatggggctgagc
tgcctggcgccggacatcaaccgcagcctggcggatttttcggtcgagccggtccaatat
gaaggcgacgacccgcgcctgggctttgccgtacgctatgcgctgggcgggctgaaaggc
gtgggcgagaaggcgatggaacagcttgtggccgagcgggaggttggcggcccgttcaag
tcgctggatgattttgccgaccggatcgagccgcgtctgctcaaccggcggcaattggaa
agcctggcggcggctggcgccttcgacggcgtgcatgccgaccgggccggcgtccatgca
gcggcggaaacgatcctcagcgtcgcctccagcgctgcggaggcaagggaaagcggtcag
ggcggtctgttcggagatgtcgaaacgccgcatgcggatgtccgcatcccgccgcaccag
acctggtcgacggcggaccgcatggcgcaggaaaaggatgccttcggcttctatttctcc
gcgcatccggtggaccgctaccgccatctggcagaggcgcgcggcgcgaaaagctatggc
gcgatttgcgccgaaccggtggctgagggcggacgtgccaccggcgtgatggcggccatg
gtcgaggatgtgcgctggcgtgaaaccaagcggggtgcgcgttatgccgccgccacattc
tccgacagcagcggtcagtttcaggcgagctgcttcgatgaggatgcctgcaaggctatc
gaggatatggcgcgcgaaggcgattgcgcgttgctgatggttgaactggaccgcttgccg
ggcgaagaaacgccgcgggtgacggttcgcggggtggagcctttccgccaattggccaat
agttcccgcatggaactggtggtcgatgtgagcgatgcagccgcaatcgggacgttggcg
caacttctggcgcgcgcgaagggaggacggagcgaagtcttcctgcgtgcgcccgtgggg
ggaggcaaggcggcgcggttgttcctgggcgacgattatctgatcggcgcggaccaggtc
gacagcatcgcgacgattgccggcctgcgcattggctcgttcgaacggatggaagccaaa
gcggacggctatcgcgcacgcaatcggcgttcgggcttgcgcttggtggcgggttga
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