Sphingobium fuliginis KK22: H5V43_06130
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Entry
H5V43_06130 CDS
T06985
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sbar
Sphingobium fuliginis KK22
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_06130
Enzymes [BR:
sbar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H5V43_06130
DNA repair and recombination proteins [BR:
sbar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H5V43_06130
Prokaryotic type
H5V43_06130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Usp
Motif
Other DBs
NCBI-ProteinID:
QOT72693
UniProt:
A0A7M2GJC5
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All DBs
Position
1:complement(1314640..1316016)
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AA seq
458 aa
AA seq
DB search
MSDPVILWFRQDLRLADQAALAAAVQEGPVIPVYVLDDQAPRQWKVGGASRWWLHHSLKS
LDENLREKGSRLILRQGNCIDQIVQIAEETGARRVHALHHYEPWWRNAEKALVKRLELCL
HDGALLLPPGAVRTGEGNSYRIYTPFARAVMEHMPPAEPVRAPSRIDAPGRWPKSDSLDR
WGLSPTKPDWARAFSRDWTPGEAGARANVAAFLDQVADYDRARNLPSLEGSSRLSPHLHF
GEVSPAYVWRRVAGAPGDATTFLKELIWRDYAHTQIWAMPAYGSENARPAFDAMPWRDLR
EAGADFKAWKTGRTGYPIVDAGMRQLWTTGWMHNRVRMIAASFLIKHLLIDWRHGARWFW
DTLVDASYANNSVNWQWVAGSGVDANIFSRIMAPLTQSGKFDAADYIRAWVPELAHLNDD
IIHDPEAHDARPSDYPAKCIGHREGRERALAAWRGIRP
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccccgtaattctctggtttcgtcaggacctgcgccttgccgatcaggccgca
ctggcagccgccgtgcaggaagggccggtgattcccgtctatgtgctggacgatcaggcg
ccgcgccaatggaaggtgggcggagcgtcgcgctggtggctgcaccatagcctgaagagc
ctggacgaaaatcttcgggagaagggatcgcgcctgatcctgaggcagggaaactgcatc
gatcagatcgtccagatcgctgaggaaacgggcgcccggcgcgtgcatgccctgcatcat
tacgaaccctggtggcgcaatgcggagaaggcgctcgtcaaaaggctggagctgtgcctg
catgacggcgcattgctgctgccgcccggcgcggtgcggacgggcgaaggaaacagctat
cggatctatacccccttcgcccgcgccgtgatggagcatatgccgccggccgaaccggtt
cgcgcgccttcgcgcatcgatgcgccaggacgttggccgaaaagcgattcgctggaccga
tggggcctttcgccgaccaagcccgattgggccagggccttttcacgcgactggactcct
ggggaagcgggggcgcgggccaatgtcgccgcctttctcgaccaggtggcggattatgac
agggccaggaacctgccctcgctggaggggagctctcgcctgtcgccgcacctccatttc
ggggaggtctcccccgcctatgtctggcgccgggttgccggagcgcccggcgatgcgacg
accttcctcaaggaactgatctggcgcgactatgcccatacgcagatatgggccatgccc
gcctatggatcggaaaatgcgcggccagccttcgacgcgatgccctggcgcgatcttcgc
gaggctggtgccgatttcaaggcgtggaagacagggcgcacgggctatcccattgtcgat
gccggcatgcggcagctctggacgacgggctggatgcataatcgggtgcgcatgatcgcg
gccagcttcctgatcaagcatctgctgatcgactggcggcatggggcgcgctggttctgg
gatacgctggtcgatgcgagctacgccaataatagcgtcaactggcaatgggttgcaggc
agcggcgtcgatgccaatatcttctcgcggatcatggcgcccctgacccagtcgggaaag
ttcgacgccgcggactatatcagggcctgggtgccggaactggcgcatctgaacgatgac
atcattcacgaccccgaagcgcatgacgcgcgtccgtccgattatccggccaagtgcatc
ggtcatcgggaggggcgtgaacgggctctcgccgcatggcgcgggatcaggccatga
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