Sphingobium fuliginis KK22: H5V43_06330
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Entry
H5V43_06330 CDS
T06985
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar00550
Peptidoglycan biosynthesis
sbar01100
Metabolic pathways
sbar01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H5V43_06330 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H5V43_06330 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbar01011
]
H5V43_06330 (mrdA)
Enzymes [BR:
sbar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H5V43_06330 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbar01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
H5V43_06330 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
EABR
Motif
Other DBs
NCBI-ProteinID:
QOT72731
UniProt:
A0A292ZDU4
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All DBs
Position
1:1362404..1364473
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AA seq
689 aa
AA seq
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MKLPLLKKKTVTEASLSFTFTRRAMVVGGLQGAIGALLVGRMGWISVAENEKYNLLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPERATDAENTIRSLAHLLALSDDEVD
RIKEELDKSAGFRPVQVAEKLTYDQFAAVSVRLPDLPGVAPSQGFSRNYPAGATVGHLLG
YVGAASAKDYEERKDPLLITPGFKVGKDGLERSFDKELTGKPGAKRVEVTARGKIVRELT
TRPDTPGNAIKLTIDAGLQEYAGRRLATQSGSVVVIDCHNGDVLAMASMPSFDPNSFSDG
ISHLEWDMLSKDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGVSPMETVNCAGAIRVG
NTLFHCHKRRGHGGLNMRGAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQKFALPFPS
QSFGTVPDPAWKLKKYNQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGRQLMPNFI
FGAQRPTPASVGVNEEHLVTIRDAMSAVVNGGGTGGAARIPLPGVMMAGKTGTAQVRRIT
MAERGGGVRSNASLPFKLRDHALFQGFAPFDNPRYAIACIIEHGGHVNRIEDAPMIAADT
MTFLFDQAKAVEKLETIEKDWGGPPAERLARQMAAYRLAKAIEKGEAPLPEAANAMNAST
GNGATATAAPPPAPAAEADDAPPPADSAP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcccctgctcaagaagaagaccgtcaccgaagcctccttgtccttcaccttc
acgcgccgggcgatggtggtggggggcctgcaaggggcgatcggggcgctgctggtcggg
cgcatgggctggatcagcgtcgccgagaatgagaaatataatctgctgtcggaaagcaat
cgcgtcaacctgacgctgattccgccgcgacgcgggtggatcatcgaccgcaacggacgg
ccgctggcgaacaatcgcacggacttccgcgtcgacctgatcccggagcgggcgacggac
gcggagaacaccatccgcagcctcgctcatctgctggcgctcagcgatgacgaagtggat
cggatcaaggaggaactggacaagtcggcaggtttccgcccggtgcaggtggcggaaaag
ttgacctacgatcagttcgcggcggtcagcgtccggctgcccgacctgccgggcgtggcc
ccgagccagggcttttcccgcaattatccggcaggtgcgaccgtcgggcacctgctcggc
tatgtcggcgcagcgtcggccaaggactatgaggagcgcaaggacccgctgctgatcacg
cccggcttcaaggtcggcaaggacgggctggagcggtctttcgacaaggaactgacaggc
aagcccggcgcgaaacgggtggaggtgacggcgcggggcaagatcgtgcgggaactcacc
acccggcccgacacgccgggcaacgcgatcaagctgaccatcgacgcgggcctccaggaa
tatgccgggcggcggctggcgacgcagagcgggtcggtggtggtgatcgactgccataat
ggcgacgtgctggccatggcgtccatgcccagtttcgatccgaacagcttttccgacggc
atcagccatctggaatgggacatgctgtcgaaggacgaccatgtcccgttgcgcaacaag
acgttgcaggggctgtacccgccgggatcgacggtgaagccgatggtggcgctcgcactg
ctggaggcgggagtttcacccatggagacggtgaactgcgcgggtgcgatccgggtcggc
aacacgctgttccactgccataaacggcggggccatggcgggctcaacatgcggggcgcc
attgcccaaagctgcgacatctacttctaccagatggcgcagcggatcggcatggaccgg
atcgccagcatggcgcggcgcgtgggcatggggcagaaattcgcccttcccttccccagc
cagagtttcggcaccgttcccgatccggcgtggaagctcaagaaatacaatcagaaatgg
caggtctacgacacggtcaacgcgaccatcggccagggctatatgctcatcaacccgttg
cagatggctgtaatggcggcgcggctggcgacgggccggcagttgatgcccaacttcatc
ttcggcgcgcagcggcccacgcctgcgtccgtgggggtgaatgaggagcatctggtgacc
atccgcgacgcgatgagcgcggtggtgaacggcggcggcacgggcggcgcggcccgcatc
cccctgcccggcgtgatgatggccggcaagaccggcacggcgcaggtccgccgtatcacc
atggccgaacgcgggggcggcgtgcgcagcaacgcatcgctgccgttcaagctgcgcgac
catgcgctgttccagggcttcgcgccgttcgacaatccccgctatgccattgcctgcatc
atcgagcatggcggccacgtcaaccgcatcgaggacgctcccatgatcgcggcggacacc
atgactttcctgttcgaccaagcgaaggctgtcgagaagctggagaccatcgaaaaggac
tggggcggtccgccggccgaacggctggcgcggcagatggcggcctacaggctggcgaag
gcgatcgagaagggcgaggcgcctcttcccgaagccgccaatgcgatgaacgcatccacc
ggcaatggcgcgaccgcgaccgccgccccgcctccggcaccggctgccgaagcggacgac
gccccgcccccggcggacagcgcgccatga
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