Sphingobium fuliginis KK22: H5V43_08130
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Entry
H5V43_08130 CDS
T06985
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
H5V43_08130 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_08130 (uvrA)
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
H5V43_08130 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
H5V43_08130 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
DnaJ_CXXCXGXG
AAA_21
AAA_25
AAA_23
TylF
Motif
Other DBs
NCBI-ProteinID:
QOT70148
UniProt:
A0A7M2GC27
LinkDB
All DBs
Position
1:1711699..1714611
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AA seq
970 aa
AA seq
DB search
MLTTISVRGAREHNLKGVDVDLPRDSLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIPY
SPATGLPISAQTVSQMVDRVMQLPEGTRFYLLAPVVRGRKGEYRKELAEWQKAGFTRVRI
DGELYAIEDAPALDKKYKHDIEVVVDRLAVSDDMATRLADSFEQALKLADGLAYVDLADG
AVPGREVEAESTGNLKGAGIPANRIVFSEKFACPVSGFTIAEIEPRLFSFNAPQGACPAC
DGLGERQEFDPELVVPNEALSLKKGAVVPWAKSNPPSPYYMQVLGSLAKEFGFSLDTPWA
DLPGEVKLIILHGTAGRPVTLRFVDGKKSYEVKKPFEGVIGNLNRRLLQTESAWMREELS
KYQTAMPCETCHGARLKPEALAVKIAGEDISMSTRRSVVDALGFFSTLPSRLNDQQNQIA
RAILKEIVERLGFLNNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPS
IGLHQRDNDRLLVTLKRLRDLGNTVIVVEHDEDAIRTADYIVDMGPGAGVHGGTIVAQGT
LNELLAHKDSLTADYLNGARRIEVPPRRRKGSGKKLTVHNARANNLQNVTASIPLGTFTC
ITGVSGSGKSSFTIDTLYAASARTLNGARIVAGPHDKVTGLEHCDKVIDIDQSPIGRTPR
SNPATYTGAFTNIRDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLPD
VYVTCDVCHGARYNRETLEVKFKGKSIADVLDMTVEDAVEFFKAVPPIRDKMAMLAEVGL
GYVKVGQQATTLSGGEAQRVKLAKELSRRATGNTLYILDEPTTGLHFEDVRKLLEVLHAL
VEQGNSVVVIEHNLDVIKTADWIIDMGPEGGVKGGEVVAEGTPEKVAKNARSFTGRYLAP
LLGMEAVAAE
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaccataagcgtccgcggcgcacgcgagcataatctcaagggcgtcgacgtc
gaccttccgcgcgacagcctgatcgtcatcaccggcctttccggctcgggcaagtcctcc
ctcgccttcgacaccatctatgccgagggtcagcgccgctatgtcgaatccctctccgcc
tatgcgcgccagttcctggagatgatgcagaagccggatgtagagcatattgacggcctc
tcccccgccatctccatcgagcagaagacgaccagccgcaacccgcgctccacggtcgcc
accgtgacggaaatctacgactatatgcgcctcctctgggcgcgcgtcggcatcccctat
tcgcccgccacgggcctccccatcagcgcccagacggtcagccagatggtcgaccgcgtg
atgcagctgcccgaaggaacgcgcttctacctcctcgcccccgtggtccgcggccgcaag
ggcgaatatcgcaaggaactggcggagtggcagaaggccggcttcacccgcgtccgcatc
gacggcgaactctacgccatcgaggacgcccccgccctcgacaagaaatacaagcatgac
atcgaagtggttgtcgaccgcctcgccgtcagcgacgacatggccacccgcctcgccgac
agcttcgagcaggccctgaaactcgccgacggcctcgcctatgtcgacctcgcggacggc
gccgtccccggccgcgaggtcgaagcggaatccaccggcaacctcaagggcgcaggcatc
cccgccaaccgcatcgtcttcagcgagaagttcgcctgccccgtcagcggcttcaccata
gcggagatcgaaccgcgcctcttctccttcaacgccccgcagggcgcctgtcccgcctgc
gacggcctgggcgaacggcaggagttcgaccccgaactcgtcgtccccaacgaagccctc
agcctcaagaagggcgccgtcgtcccctgggccaagtccaacccgcccagcccctattat
atgcaggtcctcggctccctcgcgaaggagttcggcttctccctcgacaccccctgggcc
gacctgccgggggaggtgaagctcatcatcctccacggcaccgccggccggcccgtcacc
ctgcgcttcgtcgacggcaagaaaagctatgaggtgaaaaagcccttcgaaggcgtcatc
ggcaacctcaaccgccgcctcctccagaccgaatccgcctggatgcgggaggaactcagc
aaataccagaccgccatgccgtgcgagacctgccacggcgcccgcctcaagccggaggcg
ctggcggtgaagatcgcgggggaagacatctccatgtccacccgccgctcggtggtggac
gcgctcggtttcttctccaccctccccagccgcctcaacgatcagcagaaccagatcgcc
cgcgccatcctcaaggaaatcgtggagcgcctcggcttcctcaacaatgtcggcctcgac
tatctgaacctggaccgcaccagcggcaccctgtccggcggcgagtcccagcgcatccgc
ctcgcctcgcagatcggcagcggcctgtcgggcgtcctctacgtcctcgacgaaccctcc
atcggcctgcaccagcgcgacaatgaccgcctgctcgtcacgctcaagcgcctgcgcgac
ctcggcaacaccgtcatcgtcgtggaacatgacgaggatgcgatccgcaccgccgactat
atcgtcgacatggggccgggcgcgggcgtccacggcggcaccatcgtcgcgcagggcacc
ctgaacgaactgctcgcgcacaaggacagcctgaccgccgactatctgaacggcgcccgc
cgcatcgaagtcccgccccgccgccgcaagggatcgggcaagaaactcaccgtccacaac
gcccgcgccaacaacctgcaaaatgtcaccgccagcatcccgctcggcaccttcacctgc
atcaccggcgtatcgggctcgggcaagtccagcttcaccatcgacaccctctatgcggcg
tccgcccgcaccctcaacggcgcccgcatcgtcgccggcccgcacgacaaggtgacgggc
ctcgaacattgcgacaaggtgatcgacatcgaccagtcgcccatcggccgcaccccccgc
tccaacccggcgacctataccggcgccttcaccaacatccgcgactggttcgccggcctc
cccgaagcgcaggcgcgcggctacaagcccggccgcttcagcttcaacgtcaagggcggc
cgctgcgaagcctgccagggcgacggcgtgctcaagatagagatgcacttcctccccgac
gtctacgtcacctgcgacgtctgccacggcgcccgctacaatcgcgagacgctggaggtg
aagttcaagggcaagtccatcgccgacgtcctcgacatgacggtcgaggacgcggtcgaa
ttcttcaaggccgtgcccccgatccgcgacaagatggcgatgctggccgaagtgggcctg
ggctatgtcaaggtcggccagcaggcgacgaccctgtccggcggcgaagcccaacgcgtc
aagctcgccaaggaactctcccgccgcgccaccggcaacacgctctatatcttggacgaa
cccaccaccggcctccatttcgaagacgtccgcaaactgctcgaagttctccacgccctc
gtcgaacagggcaacagcgtggtcgtgatcgaacacaatttggatgtcatcaagaccgcc
gactggatcatcgacatgggcccggaaggcggcgtcaaaggcggcgaagtcgtcgccgaa
ggcacaccggagaaggtggcgaagaacgcccggagctttaccgggcggtacttagcgccg
ttgttggggatggaggctgtggcggcggaataa
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