Sphingobium fuliginis KK22: H5V43_11685
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Entry
H5V43_11685 CDS
T06985
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar02020
Two-component system
sbar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H5V43_11685
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H5V43_11685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbar03021
]
H5V43_11685
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sbar02035
]
H5V43_11685
Transcription machinery [BR:
sbar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H5V43_11685
Bacterial motility proteins [BR:
sbar02035
]
Flagellar system
Flagellar assembly proteins
Stator
H5V43_11685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
QOT70778
UniProt:
A0A4V1W9Y4
LinkDB
All DBs
Position
1:complement(2435630..2436367)
Genome browser
AA seq
245 aa
AA seq
DB search
MFMNRVVAGSDANTYGRSAHANSPERLARQYMPLVRKIAWHVHGRVSSAIEIEDLLQIGM
VALVEAANGFEDRGLGFASYAQMRVRGAMIDHLRRHATMTRSAMSQRKQLGAIRNRLEQK
LGRAPLEAEMSAEMGLDPAAYREVADGCEMVQHSSMDEVYSDQSMWFADVEDRADDVMER
ESLKAALAKCIGDLPQREALVLQLYFVEELNLEEIGATLDIGAARVCQIKKAALDRLREK
LRDWD
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgaatagggtcgtcgccggttccgatgccaacacctatggccggtccgcccat
gccaattcgcccgaacggctggcgcgccaatatatgccgctggtgcgcaagatcgcctgg
catgtccatggccgggtatcgagcgccatcgagatcgaggacctgctccagatcggcatg
gttgcgctggtcgaggcagccaatggcttcgaggatcggggccttggcttcgcctcctat
gcgcagatgcgcgtgcgcggggcgatgatagaccatctgcgccgccatgcgacgatgacg
cgttccgccatgtcgcagcgcaagcagttaggggccatccgcaaccggttggagcagaag
ctgggccgtgcgccgctggaggcggagatgtccgccgaaatggggctggaccccgccgcc
tatcgcgaagtggcggatggctgcgagatggtgcagcatagcagcatggacgaggtctat
tccgaccagtccatgtggtttgccgatgtcgaggatcgcgccgacgatgtgatggagcgg
gaatcgctcaaagccgcgctcgccaaatgcataggcgacctgccgcagcgggaggcgctg
gtgcttcagctttatttcgtcgaggaactcaatctggaggagatcggcgcgacgctggac
atcggcgcggcgcgggtgtgccagatcaagaaggccgcgctggacaggctgcgcgagaaa
ttgcgggattgggactga
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integrated database retrieval system
