Sphingobium fuliginis KK22: H5V43_14340
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Entry
H5V43_14340 CDS
T06985
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H5V43_14340 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_14340 (ruvB)
Enzymes [BR:
sbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H5V43_14340 (ruvB)
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H5V43_14340 (ruvB)
RecFOR pathway proteins
H5V43_14340 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_3
AAA_16
AAA_22
Sigma54_activat
AAA_18
nSTAND3
AAA_17
Rad17
TsaE
RNA_helicase
AAA_28
AAA_14
NB-ARC
AAA_33
AAA_25
ABC_tran
NACHT
IstB_IS21
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QOT71256
UniProt:
A0A7M2GEW2
LinkDB
All DBs
Position
1:complement(2960998..2962017)
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AA seq
339 aa
AA seq
DB search
MSEDRLISSTRRVEDADAALRPKSLAEFIGQQGARENLRIFIEAARGRGEALDHVLFFGP
PGLGKTTLAQIVAREMGVGFRATSGPVIAKSGDLAALLTNLDEGDVLFVDEIHRLNPAVE
EVLYPAMEDRALDLMIGEGPSARSVRIDLPPFTLVGATTRQGLLTTPLRDRFGIPVRLQF
YTVDELELVVRRAARLLDLAITSDGAVEIARRSRGTPRIAGRLLRRVRDFANVAGAPAVD
AKVADAALTRLDVDHLGLDLMDRRYLTMIADIYRGGPVGVETLAAGLSEARDTIEEVIEP
YLIQLGLIARTARGRCLNGPGWKHLGINPPSNVQDGLFD
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggatcgcctgatctcctccacccggcgggtcgaggatgccgacgccgcgctg
cggcccaaatcgcttgccgaattcatcggccagcagggcgcgcgggaaaatctgcgtatc
ttcatcgaggccgcccggggccgcggcgaggcgctggatcatgtgctgttcttcggcccg
cccggccttggcaagacgacgctggcgcagatcgtcgcccgcgaaatgggcgtggggttc
cgcgcgacatccggccctgtgatcgccaagtcgggcgatctggccgcgctgctcaccaat
ctggatgagggcgacgtcctcttcgtggacgagatccaccggctcaaccccgcggtcgag
gaagtgctctaccctgccatggaggaccgggcgctcgacctgatgatcggggaaggcccc
tccgcccggtctgtgcggatcgacctgccgcccttcaccctggtcggcgcgaccacgcgg
cagggcttgctgacgacgcccctgcgcgaccgattcggcattccggtgcggctgcaattc
tataccgtcgacgagctggaactggtggtgcgccgcgcggcccggctgctggaccttgcc
atcacttccgacggcgcggtggagatcgccaggcgttcccggggcacgccgcgcatcgcc
ggacggctgctgcggcgggtgcgcgacttcgccaatgtggcgggcgccccggccgtggat
gcgaaggtggccgatgccgcgctgacccggctggatgtcgaccatctcggcctcgacctg
atggaccgccgttacctgaccatgatcgctgacatctatcgcggcgggccggtgggagtg
gaaacgctcgcggcaggcctctccgaagcgcgcgatacgatcgaggaagtgatcgagcct
tatctgatccaactcggcctgatcgcccgcactgcgcgaggacgctgcctcaacgggccg
ggctggaagcatctgggaatcaatccgccctccaatgtccaggatggcttgttcgattag
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