Sphingobium fuliginis KK22: H5V43_14750
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Entry
H5V43_14750 CDS
T06985
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
H5V43_14750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbar03019
]
H5V43_14750
03009 Ribosome biogenesis [BR:
sbar03009
]
H5V43_14750
04131 Membrane trafficking [BR:
sbar04131
]
H5V43_14750
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbar04147
]
H5V43_14750
Messenger RNA biogenesis [BR:
sbar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
H5V43_14750
Ribosome biogenesis [BR:
sbar03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
H5V43_14750
Membrane trafficking [BR:
sbar04131
]
SNARE
SNARE associated proteins
Others
H5V43_14750
Autophagy
Aggrephagy
Other aggrephagy associated proteins
H5V43_14750
Exosome [BR:
sbar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
H5V43_14750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_14
TIP49
IstB_IS21
NACHT
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
AAA_18
AAA_30
Mg_chelatase
AAA_7
Zeta_toxin
ABC_tran
AAA_11
AAA_17
AAA_24
AAA_19
Sigma54_activat
DUF815
TsaE
ATPase
AAA_3
Parvo_NS1
NB-ARC
AAA_lid_PRS2_C
SLFN-g3_helicase
AAA_25
PhoH
bpMoxR
Sigma54_activ_2
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QOT71328
UniProt:
A0A4Q4J537
LinkDB
All DBs
Position
1:3045940..3048234
Genome browser
AA seq
764 aa
AA seq
DB search
MAEEETAGRRIQVANARPEDAGRGLARLPLAVMAELHLAEGDVVEIAGKRSTPARVVRPY
KEDEGLDVLRLDGLQRANAGVGSGDFVIIRKVDPRPAQRVVFAPAQNNLRLQGNPEALKR
VFFQRPLASGDVVATAGQQQVPPGDMPPQLRQMLAAPAYALQEIRLVVVSTVPKGIVHID
ADTEVELRAEYEEPRESRRADVTYDDVGGMAEAIDQLREMVELPLRYPELFERLGVDPPK
GVLLHGPPGTGKTRLARAVANESEAEFFLINGPEIMGSAYGESEKQLREIFEAAAKSAPS
ILFIDEIDSIAPKRGNVTGETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEALRR
PGRFDREIIVGVPDERGRREILGIHTRGMPLADGVDLGELARMTYGFVGADLAALTREAA
IETVRRFMPRLNLEEGTIPPDVLEELSVARDDFMAAIKRVQPSAMREVMVQAPNIGWADI
GGLDEAQMRLKEGVELPLKDPDAFRRIGIRPAKGFLLYGPPGTGKTLLAKAVAREAQANF
IATKSSDLLSKWYGESEQQIARLFARARQVAPTVIFIDELDSLVPARGGGLGEPQVTERV
VNTILAEMDGLEELQSVVVIGATNRPTLIDPALLRPGRFDELIYVPVPDQAGRRRILSIH
TGKMPLAEDVDLDALAERTERFTGADLEDLVRRAGLVALRQSLSVDKVTQAHFEAALEDT
RASVTPEMEREYEQIQATLKQSVMQIDPIGFVSPGMLRARARTE
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaagaagaaaccgcaggacgcaggatacaggtggccaacgcgcggccagaggat
gcggggcgcggccttgcccgccttcctctggcggtcatggcggaactccaccttgctgaa
ggcgatgtggtggagatcgcgggcaagcggtcgacccccgcgcgggtggtccggccctat
aaggaggatgaggggctggatgtccttcgcctcgacgggcttcagcgcgccaatgccggc
gtcggatcgggcgacttcgtgatcatccggaaggtcgatccccggcctgcccagcgggtc
gtcttcgcgcctgcacaaaataacctgcggttgcagggcaatccggaggcgctgaagcgc
gttttcttccagcggccgctcgcctctggcgatgtcgtcgcaactgcgggacagcaacag
gtgccgcccggcgacatgccgccccagttgcgccagatgctggccgccccggcttatgcc
ctgcaggaaatccgcctggtcgtggtgtcgaccgtgcccaagggcatcgtccatatcgac
gccgacacggaagtggaactgcgcgccgaatatgaggagccccgcgaatcccgccgcgcc
gacgtcacctatgacgatgtcggcggcatggccgaagccatcgaccagctgcgggaaatg
gtggaattgccgctgcgctatcccgaactgttcgagcggctgggcgtggacccgcccaag
ggcgtgctgctccacggcccgccgggcaccggcaagacccggctggcccgcgccgtcgcc
aatgaatcggaagcggaattcttcctgatcaacgggccggagatcatgggttcggcctat
ggcgagtcggaaaagcagctccgcgagattttcgaggcggccgccaagtcggcaccgtcg
atcctcttcatcgacgagatcgattccatcgcgcccaagcgcggcaatgtgaccggggag
acggaaaagcgcctcgtcgcgcaattgctgacgctgatggacgggctggagccgcgcacc
aatctggtcgtcatcgccgccaccaaccggccggaagcgatagacgaggcgctgcgccgc
cccggccgtttcgaccgggaaatcatcgtcggcgtgcctgacgagcgcggacgacgggag
atattgggcatccacactcgcggtatgccgctcgccgacggcgtggatctgggcgaactg
gcgcgcatgacctacggctttgtcggtgcggatctggcggcgctgacccgcgaggcggcg
atcgagaccgtgcgccgcttcatgccccggctcaatctggaggagggaacgatcccgcct
gacgtgctggaggaactgtccgtcgcgcgcgacgacttcatggccgcgatcaagcgcgtc
cagccctccgccatgcgggaggtgatggtgcaggcgcccaatatcggctgggccgacatc
ggcggcctggacgaagcgcagatgcgcctcaaggaaggggtggaactgccgctcaaggac
cctgacgcctttcgccgcatcggcatccgcccggccaagggcttcctgctctacggcccg
cccggcaccggcaagacgctgctggcgaaggccgtggcgcgggaagcgcaggccaatttc
atcgccaccaaatcgtccgacctgctcagcaaatggtatggggagagcgagcagcagatc
gcccgcctcttcgcccgcgcgcggcaggtggcgccgacggtcatcttcatcgatgaactg
gacagcctggttccggcgcgcggcggcggccttggcgaaccgcaggtgacggagcgggtg
gtgaacaccatcctggccgagatggacgggctggaggaattgcagtccgtcgtcgtcatc
ggcgcgaccaatcgcccgacgctgatcgatccggcgctgctgcggccgggccggttcgac
gagctgatctatgtccccgtgcccgatcaggcggggcgcaggcgcatcctgtccattcac
acgggcaagatgccgcttgccgaggacgtcgatctggatgcgctggcggagcgcacggaa
cggttcaccggggccgatctggaggatctggtccgccgcgccggcctggtcgcgctgcgc
cagtcgctgtcggtcgacaaggtcacacaggcgcatttcgaagcagcgctggaggatacc
cgcgcctccgtcacgcccgaaatggagcgggaatatgagcagatccaggcaacgctgaag
cagagcgtgatgcagatcgatcccatcggcttcgtgtcgcccggcatgttgcgggcgcgc
gccaggactgaatga
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