Sphingobium fuliginis KK22: H5V43_18740
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Entry
H5V43_18740 CDS
T06985
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar00061
Fatty acid biosynthesis
sbar00071
Fatty acid degradation
sbar01100
Metabolic pathways
sbar01212
Fatty acid metabolism
sbar02024
Quorum sensing
sbar04146
Peroxisome
Module
sbar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
H5V43_18740
00071 Fatty acid degradation
H5V43_18740
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
H5V43_18740
09145 Cellular community - prokaryotes
02024 Quorum sensing
H5V43_18740
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbar01004
]
H5V43_18740
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbar04147
]
H5V43_18740
Enzymes [BR:
sbar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
H5V43_18740
Lipid biosynthesis proteins [BR:
sbar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
H5V43_18740
Exosome [BR:
sbar04147
]
Exosomal proteins
Exosomal proteins of breast milk
H5V43_18740
Exosomal proteins of breast cancer cells
H5V43_18740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QOT74161
UniProt:
A0A7M2GN42
LinkDB
All DBs
Position
2:567365..568846
Genome browser
AA seq
493 aa
AA seq
DB search
MSGDVIVGDRIRGRAELLDRAARLASAMAAAGVGAGDAVALLLRNDFAVLEANLAVRRLD
AYGVPINWHWHPTEIGYVLRDATPRLLIGHADLLDGLGAHIPKGLRVIAVGGSGEQPDYD
DWIAAHEPHEGHGNGLGSSMVYTSGTTGKPKAVRRLPATGEESAQRARVLAVIHDTAPGN
VALVTGPLYHLFSQAILMATFAAGGTVVVMERFDPEDCLRLIEQHHVTHGALVPTLFVRL
LRLPEEVKGRYDLSTLRHVVHSGAPCAPEVKRAMLNWWGPVLYETYGSTETGVVTKISPR
EWLARPGSVGRPVLTGEVRIRGEDGQWTEAGRTGDVYLRIHGTPDFTFHGDPEKRAAVEY
DGLITCGDMGWLDEEGYLFLCDRRADMVLSGGVNIYPAEVEAALLEHPAVSDCAVFGVPD
SEYGEVLVAYLQSDEALIPDEVTAFLRGRIAGYKIPRHLVVGASLPREETGKILKRRLRE
SFLAGEARETGAY
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgatgtgatcgtcggcgatcgcattcgcggacgcgccgaactgctcgaccgg
gcggcgcggctggcgagcgcgatggcggcggcaggcgtcggcgcgggcgatgcggtggcg
ctgttgctgcgcaacgactttgccgtgctggaagccaatctggccgtgcgcaggctcgac
gcctatggcgtgccgatcaactggcactggcacccgacggagatcggctatgtgctgcgc
gacgcgacgccccggctgctgatcggccatgccgacctgctggacgggctgggcgcccat
attcccaaaggcctgcgcgtgatcgccgtcggcggttcgggcgagcagccggattatgac
gactggatcgctgcccatgaaccccatgagggccatggcaacggtctcggttcctccatg
gtctacacgtcgggcaccacgggcaagcccaaggcggtcaggcgcctgcccgcgacaggc
gaggaatcggcgcagcgcgcccgtgtgctggcggtcatccatgacacggcgcccggcaat
gtcgcgctggtgacgggaccgctctatcatctcttcagccaggcgatcctgatggcgact
ttcgccgccgggggcacggtggtggtgatggagcgcttcgatccggaggattgcctgcgg
ctcatcgagcagcatcatgtgacccatggcgcgctggtgcccacgcttttcgtcaggctg
ctgcgcctccccgaagaggtgaagggccgatatgatctctccacccttcgtcacgtcgtc
cattcgggcgcgccctgcgcgccggaagtaaaaagggcgatgctgaactggtgggggccg
gtcctgtatgaaacctatggatcgaccgaaaccggcgtcgtcacgaagatcagtcctcgg
gaatggctggctcgacccggcagcgtcggccgacctgtcctgactggtgaagtccgtatt
cgtggcgaagacggccaatggacagaggcggggcggacgggcgacgtctacctgcgcatc
cacggcacgcccgatttcacttttcacggcgatccggaaaagcgcgccgccgtcgaatat
gacggccttattacctgcggcgacatgggctggctggacgaagaaggctatctgtttctg
tgcgaccggcgcgcggacatggtgttgtccggcggggtcaacatctatccggcagaggtg
gaggctgccttgctggagcatcccgcggtatccgattgcgctgtcttcggcgtgccggac
tccgaatatggtgaagtgctggtcgcgtatctccagagcgacgaggcgctgatccccgat
gaggtgacagcgttcctgcgcgggcgcatcgcgggctacaagattccgcgtcatctggtc
gtcggcgccagcttgccgcgcgaggaaacgggaaagatcttgaagcgcaggctgcgggaa
agtttcctggccggcgaagcgcgggaaacgggagcatattga
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