Sphingobium fuliginis KK22: H5V43_21530
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Entry
H5V43_21530 CDS
T06985
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sbar
Sphingobium fuliginis KK22
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbar03032
]
H5V43_21530
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_21530
Enzymes [BR:
sbar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H5V43_21530
DNA replication proteins [BR:
sbar03032
]
Prokaryotic type
DNA Topoisomerases
H5V43_21530
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H5V43_21530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QOT74597
UniProt:
A0A7M2GR12
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All DBs
Position
p1:29987..31102
Genome browser
AA seq
371 aa
AA seq
DB search
MKTQEDGPADTGEAGTIVDAQEAAENAGLVYVTDDSPGIVRQPYRGKFRYRDARGNVVTD
EKTLKRIASLAIPPAYTDVWICPKANGHIQATGRDAKGRKQYRYHPRFREVRDSTKYEHM
LDFAKALPGVRERIDADLKKRGLPREKVLAAVVHLLETTMIRIGNADYAKQNKSYGLTTL
QDRHVAIEGAELRFNFKGKSGKQWRLKLKDRRIAKIVKASQDLPGQHLFQYVGEDGAQYE
VTSNDINAYLREISGTDITAKDFRTWNGTVLAALALSEYEKVDSQAAAKRNVRTAIEAVA
SRLGNTPTVCRKCYIHPEVFESYLSDELVLEARDAVEKELREDLSRLRPEEAVVLAFLQR
RLAEKAKVPAL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacaagaggatgggccggctgacaccggcgaggcaggaacgatcgtcgatgcg
caggaagccgcggaaaatgcgggtctcgtctacgtaaccgacgacagcccgggaatcgtc
cgccagccctaccgcggcaagtttcgatatcgcgatgcccggggcaacgtcgtgacggac
gaaaaaactctgaagcgaattgcttcgctcgccatccccccggcctataccgatgtctgg
atctgccccaaggcaaacgggcacatccaggcgaccggccgtgacgcaaagggccgcaag
cagtatcgttaccatccgcgtttccgcgaggtacgcgacagcaccaagtacgagcacatg
ttggacttcgcaaaggcccttcctggcgtgcgcgagcgcatcgatgccgatctcaagaag
cgcgggctaccgcgtgagaaggtcctggccgccgtcgtgcatctgctcgagaccacgatg
atccgcatcggcaacgcggattatgccaagcagaacaagagttatggcctcacgaccctc
caagaccgccatgtcgcgattgagggcgctgagctccgattcaatttcaagggcaagagc
ggaaagcagtggcggctgaagctgaaggatcggcgcatcgcgaagatcgtcaaggccagc
caggatctgcccggacagcatctgttccaatatgtgggcgaagacggcgcgcagtacgaa
gtcacctcgaacgatatcaacgcttatcttcgggagatctccgggacggacatcaccgcc
aaggatttccgcacctggaatggcacggtgctcgccgccctggcgctttccgaatatgaa
aaagtcgacagccaggctgcggcgaaacggaatgtccggaccgcaatcgaagccgtcgct
tcgcggctgggcaatacgcccaccgtgtgccgcaagtgctacattcatcccgaagtcttc
gaaagctacctgagtgacgaattggtcctggaggcgcgggacgccgtcgagaaggagctt
cgggaagacttgtcccggctccgtccggaagaagctgtcgtgctggcgttcctccagcgt
cggctcgccgaaaaggcaaaggttccggccctgtag
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