Streptomyces bathyalis: G4Z16_09195
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Entry
G4Z16_09195 CDS
T07305
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sbat
Streptomyces bathyalis
Pathway
sbat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G4Z16_09195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbat03021
]
G4Z16_09195
03019 Messenger RNA biogenesis [BR:
sbat03019
]
G4Z16_09195
Transcription machinery [BR:
sbat03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G4Z16_09195
Messenger RNA biogenesis [BR:
sbat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G4Z16_09195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
AAA
Motif
Other DBs
NCBI-ProteinID:
QPP10542
UniProt:
A0A7T1WVS3
LinkDB
All DBs
Position
complement(2155811..2157808)
Genome browser
AA seq
665 aa
AA seq
DB search
MGVNAAPPESEGSGGSSSGSAPAEKADVPAKDASAAASGAAPKRRRSGTGLEGMVLAELQ
QVASGLGIKGTARMRKSQLIETIKERQTGGGSATDAPAAHGRDGDAGEGEDQSAARPKRR
ATSRARTGETGAEGQQDSGQIDIPGQPANEEKPAGDRRGRREGGKAEAAVDTAEGKADGR
GDGGQQNKGDGSGRGDRDGRGDGGGRQQQGDRPSKRDRQRGRGKGDGGGGQNQGGGQNQS
QNQGGGNRRDDDDFDGGRRGRRGRYRDRRGRRGGREDAEPQIAEDDVLIPVAGILDILDN
YAFVRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTGAVRQPREGERREKFNALVRLDSVN
GASPEGGRSRAEFNKLTPLYPQERLRLETEPNQLTSRIIDLVSPIGKGQRGLIVAPPKAG
KTMVLQSIANSITVNNPECHLMVVLVDERPEEVTDMQRSVKGEVISSTFDRPAEDHTTIA
ELAIERAKRLVELGHDVVVLLDNITRLGRAYNLSAPASGRILSGGVDSTALYPPKKFFGA
ARNIEDGGSLTILAAALVETGSRMDEVIFEEFKGTGNMELKLDRKLSEKRIFPAVDVDAS
GTRKEEILMAGDELQIIWKLRRVLHALDQQQAIELLLDKMKQTKSNTEFLLQIQKTTPTP
GNGGD
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaacgccgctcctcctgagtccgaaggctcgggtggcagctcctccgggagt
gcccccgcggagaaagccgacgtgcctgccaaggacgcttctgccgctgcctccggtgcc
gcgcccaagcgtcggcgctcaggcaccggactcgagggcatggtgctcgcggagcttcag
caagttgcctccggcctcggcatcaagggcaccgcgcggatgcggaagagccagctgatc
gaaaccatcaaggagcggcagacaggcggaggttcagccaccgacgcgcccgccgcccac
ggcagggacggggacgccggggaaggcgaggaccagtccgccgccaggcccaagcgccgt
gccacgtcccgggcgcgtacgggagagaccggcgcggagggccagcaggactccggccag
atcgacattcccggacagcccgcgaacgaggagaagcccgccggcgaccgccggggccgc
cgtgagggcggcaaggcggaagccgccgtggacaccgccgaggggaaggcggacggccgc
ggcgacggcggccagcagaacaagggcgacggcagcggccgcggcgaccgtgatggtcgc
ggcgacggcggtggccgtcagcagcagggggaccgcccctccaagcgcgaccgtcagcgc
ggccgcggcaagggcgacggcggtggcggccagaaccagggcggcggccagaaccagagc
cagaaccagggcggcggcaaccgccgggacgacgacgacttcgacggcggccggcgtggc
cgccggggccggtacagggaccgccgcggacgtcgtggtgggcgtgaggatgctgagccg
cagatcgccgaggatgatgtgctgatcccggtcgccgggatcctggacattcttgacaac
tatgcgttcgtgcggacgtcggggtatctgccgggtccgaatgatgtgtatgtgtcgctg
gcgcaggtgcgtaagaacggtctgcgtaagggtgatcacgtcaccggtgcggtgcggcag
ccgcgtgagggtgagcggcgggagaagttcaacgctctggtgcgtttggactcggtcaat
ggtgcctcgccggagggcggcaggtcgcgggcggagttcaacaagctcacgccgctgtat
ccgcaggagcggctgcggctggagaccgagccgaaccagctgacctcgcggatcatcgat
ctggtctcgccgatcggtaaggggcagcgtgggttgatcgtggcgccgccgaaggcgggc
aagacgatggtgctgcagtcgatcgcgaactcgatcacggtgaacaatccggagtgccat
ttgatggtggtgctggtcgatgagcggccggaagaggtcaccgacatgcagcggtcggtg
aagggtgaggtgatctcctcgaccttcgaccgtcccgcggaggatcacaccacgatcgcg
gagctggcgatcgagcgtgcgaagcggctggtggagctgggtcacgatgtggtggtgctg
ctggacaacatcacgcgtctgggccgtgcctacaacctctcggccccggcttcggggcgg
atcctgtccggtggtgtggattccacggcgctgtatccgccgaagaagttcttcggtgcg
gcgcggaacatcgaggacggcgggtcgctgacgattctggccgcggcgctggtggagacc
ggatcgcggatggatgaggtgatcttcgaggagttcaagggcaccggcaacatggagctg
aagctggaccggaaactctcggagaagcggatcttccccgcggtggacgtggacgcctcc
ggcacccgcaaggaggagatcctcatggcgggcgacgagctgcagatcatctggaagctc
cgccgggtcctgcacgccctggaccagcagcaggccatcgagctgctcctggacaagatg
aagcagaccaagtccaacaccgagttcctgctccagatccagaagaccacccccaccccc
ggcaacggcggcgactga
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