Streptomyces bathyalis: G4Z16_13090
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Entry
G4Z16_13090 CDS
T07305
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sbat
Streptomyces bathyalis
Brite
KEGG Orthology (KO) [BR:
sbat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbat03016
]
G4Z16_13090
Enzymes [BR:
sbat01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
G4Z16_13090
Transfer RNA biogenesis [BR:
sbat03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
G4Z16_13090
Prokaryotic type
tRNA splicing ligases
G4Z16_13090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
QPP07163
UniProt:
A0A7T1WQP5
LinkDB
All DBs
Position
complement(3023382..3024575)
Genome browser
AA seq
397 aa
AA seq
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MPYTEVPGARVPIRMWADPAGVEDVAMQQLRNVSTLPWIEGLAVMPDVHYGKGATVGSVI
AMRGAVCPAAVGVDIGCGMSAVKTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDEPVDPG
KLHGFPTAGWSDFWKRFDGVAEAVKFRQERATKQMGTLGSGNHFVELCLDTDGAVWVMLH
SGSRNIGKELAEFHIGVARELPHNQGLVDRDLAVFVADTPQMEAYRHDLFWAQEYAKHNR
DVMTGLLKDVLRKEFKKAKPRFDPVISCHHNYVAEESYEGMDLLVTRKGAIRAGDGEYGI
IPGSMGTGSYIVKGLGNPASFQSASHGAGRKMSRNAARKRFSARDLAEQTRGVECRKDSG
VVDEIPGAYKPIEQVIDQQRDLVEVVAQLKQVVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgccttacaccgaggtgccgggcgcccgcgtcccgatccgcatgtgggccgatccggcg
ggcgtcgaggacgtcgccatgcagcagctccgcaacgtctccacgctgccgtggatcgaa
gggctcgcggtcatgcctgacgtgcattacggcaagggggccacggtcggttcggtgatc
gccatgaggggcgcggtgtgcccggccgcggtcggcgtcgacatcggctgcggcatgtcc
gcggtgaagacgtccctgaccgcgaacgatctgcccggtgatctctccaggctccgctcg
aagatcgagcaggcgatcccggtggggcgggggatgcacgacgagccggtggacccgggc
aagctccacgggttcccgaccgcgggctggtccgacttctggaagcgcttcgacggcgtc
gccgaagcggtcaaattccgtcaggaacgggccacaaagcagatgggaacgctcggctcg
ggcaaccactttgtcgagctgtgcctcgataccgacggcgccgtgtgggtcatgctgcac
tcgggctcgcggaacatcggcaaggagctggccgagttccacatcggtgtggcgcgggaa
ctcccgcacaaccagggcctggtcgaccgcgatctcgccgtcttcgtggcggacaccccg
cagatggaggcgtaccggcacgacctgttctgggcgcaggagtacgcgaagcacaaccgc
gacgtgatgacgggcctgctcaaggacgtgctccgcaaggagttcaagaaggcgaagccc
cggttcgatcctgtgatctcctgccaccacaactacgtggcggaggagagctacgagggc
atggacctgctggtgacgcggaagggcgccatccgggccggtgacggggagtacggcatc
atcccgggctcgatgggcaccggctcgtacatcgtgaaggggctcggcaacccggcctcc
ttccagtcggcctcgcacggcgcgggccggaagatgagccggaacgccgcgcggaagcgc
ttctccgcccgtgacctggcggagcagacgcggggcgtggagtgccgcaaggactcgggg
gtcgtggacgagattcccggtgcctacaagccgatcgagcaggtcatcgaccagcagcgc
gacctcgtcgaggtcgtggcgcagctgaagcaggtcgtctgcgtcaaggggtga
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