Streptomyces bathyalis: G4Z16_19340
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Entry
G4Z16_19340 CDS
T07305
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
sbat
Streptomyces bathyalis
Pathway
sbat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
G4Z16_19340
09124 Replication and repair
03420 Nucleotide excision repair
G4Z16_19340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbat03021
]
G4Z16_19340
03400 DNA repair and recombination proteins [BR:
sbat03400
]
G4Z16_19340
Enzymes [BR:
sbat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G4Z16_19340
Transcription machinery [BR:
sbat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
G4Z16_19340
DNA repair and recombination proteins [BR:
sbat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
G4Z16_19340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
IMD
NanE
Motif
Other DBs
NCBI-ProteinID:
QPP08192
UniProt:
A0A7T1T871
LinkDB
All DBs
Position
complement(4439494..4441170)
Genome browser
AA seq
558 aa
AA seq
DB search
MNGGPLIVQSDKTLLLEVDHEQADECRRAIAPFAELERAPEHIHTYRLTPLGLWNARAAG
HDAEQVVDALVEHARYPVPHALLVDVAETMARYGRLRLLKHPTHGLVLETTDRPVLEEIL
RSKKIQPLTGERIDADTVVVHPSERGQIKQVLLKLGWPAEDLAGYVDGEAHPIDLVEDEW
SMRPYQQHAVEGFWHGGSGVVVLPCGAGKTLVGAGAMAQARATTLILVTNTVAARQWKHE
LVRRTSLTEDEIGEYSGTRKEIRPVTIATYQVVTVKRKGIYPHLELFDSRDWGLIIYDEV
HLLPAPVFKFTADLQARRRLGLTATLVREDGRESDVFSLIGPKRFDAPWKEIEAQGYIAP
ADCVEVRVSLTDSERLAYATAETEEKYRFCATTDSKRRVTEALVKRHEGDQTLVIGQYID
QLDELGEHIGAPVIKGDTTNKQREKLFNAFREGELSTLVVSKVANFSVDLPEATVAIQVS
GTFGSRQEEAQRLGRILRPKADGHEARFYSVVARDTIDQDFAAHRQRFLAEQGYAYRIVD
SQDLLTAQPEAAPESESE
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
gtgaacggtggccccctgatcgtccagagcgacaagacgctgttgctggaggtcgaccac
gaacaggcggacgagtgccgccgtgccatcgctcccttcgccgagctggagcgggcgccg
gagcacatccacacctaccgcctcacgccgctcggcctgtggaacgcccgtgccgccggg
cacgacgccgagcaggtcgtcgacgcgctcgtcgagcacgcccgctaccccgtgccgcac
gccctcctcgtcgacgtggccgagacgatggcccgctacggccggctccggctgctcaag
caccccacgcacggtctggtcctggagaccaccgaccggcccgtgctggaggagatcctg
aggtcgaagaagatccagccgctcaccggtgagcgcatcgacgcggacaccgtcgtcgtg
cacccctccgagcgcggccagatcaagcaggtgctgctgaagctggggtggcccgctgag
gacctggcgggttacgtggacggcgaggcgcaccccatcgatctggtggaggacgagtgg
tcgatgcgcccgtaccagcagcacgccgtcgagggcttctggcacgggggctccggcgtc
gtcgtgctgccctgcggcgcggggaagacgctcgtgggtgcaggtgcgatggcacaggcg
cgggcgacgacgctgatcctcgtcaccaacaccgttgccgcccgtcagtggaagcacgag
ctggtgcgccgtacgtcgctcacggaggacgagatcggcgagtacagcgggacgcggaag
gagatccggccggtcacgatcgccacgtaccaggtggtgacggtgaagcggaagggcatc
tatccgcacctggagctcttcgactcccgcgactggggcctgatcatctacgacgaggtg
catcttctgcccgcgcccgtcttcaagttcaccgcggacctccaggcccgccgccgcctc
ggcctgaccgcgacgctggtgcgggaggacggccgcgagtcggatgtcttctccctcatc
gggcccaagcggttcgacgcgccgtggaaggagatcgaggcgcagggctacatcgcgccc
gccgactgcgtcgaggtgcgtgtgagcctcaccgactccgaacgcctcgcgtacgcgacc
gccgagacggaggagaagtaccgcttctgcgcgaccaccgacagcaagcgccgcgtgacg
gaggcactggtgaagcggcacgagggtgaccagacgctcgtgatcggccagtacatcgac
cagctcgacgaactcggcgaacacatcggcgcgcccgtcatcaagggcgacaccaccaac
aagcagcgggagaagctcttcaacgccttccgcgagggcgagttgagcacgctggtcgtc
tccaaggtcgccaacttctccgtcgacctgccggaggcgaccgtcgccatccaggtctcc
ggcaccttcggctcacgtcaggaggaggcacagcggctgggacggatcctgcgcccgaag
gccgacggccacgaggcgcgcttctactcggtggtcgcgcgcgacaccatcgaccaggac
ttcgccgcacaccgccagcgcttcctggcggagcagggctacgcctaccgcatcgtcgac
tcccaggacctcctgacggcccagccggaggccgcacccgagagcgagagcgaatag
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