Shewanella baltica BA175: Sbal175_0562
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Entry
Sbal175_0562 CDS
T02014
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sbal175_0562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_0562
Enzymes [BR:
sbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sbal175_0562
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal175_0562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA-like_WH
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
AEG09855
LinkDB
All DBs
Position
complement(648301..650496)
Genome browser
AA seq
731 aa
AA seq
DB search
MSLFVEVALPVPMRQTFSYRVPETYPSTPQIGVRVKVPFGRQQLIGLVTGITDTCSLAPK
QIKSVLEFIDDKPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAPQKIQFW
QLTEIGQNIAPEAVKRAPAQKKLLELLKPASLTQEEVISLDISKAALKALEDKGWVARHE
KIAELNLDWRTTLEMDETPHKLNKEQAVAVATLNLQQGYHCTLLEGITGSGKTEVYLAVL
EEILKQGKQALILVPEIGLTPQTINRFKRRFKVNVAILHSGLTDNQRLEAWRQARCGQAA
IIIGTRSALFTPMAYPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLESIPVILGTAT
PSLESLQNALSGRYHHLQLGERAGAAKKVRQGIIDIKNMPLKAGMSVPLLNEIRLHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEICCHHCGNQYAIPKQCHK
CGSTMLMGQGIGTEQLAEALQLEFPKHPVVRIDRDTTRLKGSLETHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRASKPGTVLLQT
HQSDNPILRDLLHRGYGEFARSQLKERQQALLPPAWHMVLVRAEAHLASDADNFLNAFAA
LLPQDKEFEVIGPMPAPLDKKAGKFRRQLLFQAKNRNRLQQEFERIHPLVEQLIEAKRCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtttgtcgaagttgcgttacctgtgcctatgcggcaaacctttagctaccgc
gtacccgaaacttatcctagtacaccgcagataggcgtgcgcgttaaagtccccttcggt
cgtcaacaattaatcggattagtcacaggtatcacagatacgtgcagcttagcgcctaag
cagattaagtctgtgcttgagtttatcgacgataaacctttgttgcctgaatcactttat
aaattaaccctttgggccgcgagatactatttttgtagccaagggcagatgctaacccaa
gccttaccagtggcccttcgcaaagggctcgatgccgcgccgcaaaagatccaattctgg
caattaactgagataggccaaaatattgcgccagaagcggttaagcgagcacccgcacag
aaaaaattactcgagttactcaaacccgccagcttaacccaagaagaagtgatcagctta
gatatcagtaaagcggcacttaaagccctagaagataaaggctgggtggcgcgccacgaa
aaaatcgccgagcttaacctcgactggcgcaccacactcgaaatggacgaaacgccacat
aaactcaataaagaacaagccgtcgccgttgccactttaaatctgcaacaagggtatcac
tgtactttattagaaggcattaccggttcgggtaaaacggaagtctatttggcggtgctc
gaggaaatcctcaagcaaggcaagcaagcgttaattttagtgcctgaaatcggcttgacg
ccccagacaatcaatcgctttaagcgccgtttcaaagtcaatgtcgccatattgcactca
gggttaaccgacaatcaaagactcgaagcttggcgccaagcccgctgtggtcaggccgcc
ataattatcggcacccgctcggccttgttcacgccgatggcctatcccggcatcatcata
ctcgatgaagaacacgacagtagcttcaagcaacaggaaggtgtcggttatcacgcccgc
gacttggcagtcatgcgtggccatttagaatcaattcctgtgatattaggcacggcaacg
ccctcactcgaaagtctacaaaatgccttaagtggccgttaccatcatttgcaattgggt
gaacgcgctggcgcggctaaaaaagtgcgccaagggattatcgacattaaaaatatgccg
ttaaaagcaggaatgtcggtgccgctgctgaacgaaatccgtctgcatttagacgcaggt
aaccaagtattactgtttctcaatcgccgcggcttcgcacccgctctgctttgccacgag
tgtgggcacttacacgaatgcgaccgctgcgacgcgtttttcaccgtacatcaatccctt
ggtgaaatttgctgccaccattgtggcaatcaatatgccatccctaagcaatgccacaaa
tgcggcagcactatgctgatgggccaaggtataggcacagagcaactcgccgaggcactg
cagctggagtttccgaaacatccagtggtacgcatcgaccgcgatactactcgcttaaaa
ggctcactagaaacccacttaaatgcaattcataagggcgaatataaaatcctcgtgggc
acgcaaatgctggctaagggtcatcactttcctgatgtgacacttgttgggctactcgat
gtcgatggtgccttatttagcgccgacttccgcgcgcccgagcgttttgggcaactctat
acccaagtcgctggtcgtgcgggccgtgccagtaaacccggcactgtattattgcaaact
caccagagcgacaatcctattttgcgggatttgctgcaccgcggttatggcgagtttgct
cgcagccagctaaaagagcgtcaacaagcactgctgccgccagcatggcacatggtgttg
gtgcgcgccgaagcgcatttagccagtgatgccgataactttctcaacgccttcgccgcg
cttttgccgcaagataaagaatttgaggtaattggtcctatgcccgcgcccttagataaa
aaagccggcaagttccgtcgccaactgctattccaagcgaaaaaccgcaaccgcctacag
caagagtttgaacgtattcatccgcttgtggagcaacttatcgaagccaaacgctgcaga
tggagcttagacagggatccgcaggatctcctctga
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