Shewanella baltica BA175: Sbal175_0566
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Entry
Sbal175_0566 CDS
T02014
Name
(GenBank) diguanylate cyclase/phosphodiesterase
KO
K18765
RNase E specificity factor CsrD
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbb03019
]
Sbal175_0566
Messenger RNA biogenesis [BR:
sbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Sbal175_0566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
Motif
Other DBs
NCBI-ProteinID:
AEG09859
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All DBs
Position
654054..655997
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AA seq
647 aa
AA seq
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MKFTRMLTTKLTSFWLMSLAAIAFVFLLSAMMSFVQLTYKFQQQKVAELETMLVDQYQHQ
PDWDLEAWLPPMLLAYNAVDFRLTLKNEVIFAYEGNLTTQNAMVYDHVLDPKSGLRMQLT
LTQPFEHYTFSWYEILILLVGVLAVAALVRFGYLWFSQQLDGIEELALRSRLILQGKHEQ
ALATPGNGKPRLINRALTKLLEELQDAQKERGRFDKFIRSNTFLDAETRIGNRLFLNNRL
DALSHNQAMLAHGVIYLLEMDDLDLLQQSQGEAVTKELLNSTVNAISQLLQTQANSIFAR
RSHNQFAIVVPQISLIEADQFASKLLKICLSQPLPEVENSDNFFHLGCAYFTAGDNAAQL
IEEADMALRAAQLQGNSNWFMYDKGAIDEEFAKGSVRWRSFLENALVQRRFFPFSQPIID
SDGHEHHKEIFTRARDNQGALIRATLFIPMANKCGLMPQVERQIIERVLLLLSNELAGGV
SNTQTNKKPASQIYSINLSLDSLMSRAFTQWLKTTLLEYRHLTTRLIFEVSEDIVIQHQE
KLQPKLDMIRKMGARLCVDHVGQQVVGTYYIRECHFDLIKLHRSIVRHIHLRPENQLFIR
SLIGGLYRTEVQVCAEGVEVFEEWQTLQILGVGAAQGMYFSEPIEAK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcacccgaatgttaactacaaaattaaccagcttttggttaatgtcattagcc
gctattgccttcgtatttttgctgagcgctatgatgagtttcgtgcagctgacctataaa
tttcagcagcagaaagtcgccgaactcgaaactatgttagtggaccaatatcaacaccaa
cccgattgggatttggaggcttggctgccgcccatgctgctcgcctacaatgctgttgat
tttcggctgaccttgaaaaatgaagtgatctttgcctatgaaggcaatctcactacgcaa
aatgccatggtgtatgaccatgtgttagatccaaaatctggtctgcgtatgcagctgacc
ttgacccaacctttcgagcattacacttttagttggtatgaaatcctcatcctgttggtc
ggtgtgttagctgtggctgccttagtgcgttttggctatttatggttttcccagcaattg
gatggcattgaagaattagccttacgcagtcgattgatcttgcaaggtaagcacgagcaa
gcactcgcgactcccggaaatggcaagccaaggctgattaaccgtgctttgaccaagttg
ttagaagaattacaagacgcacaaaaagaacgcggtcgttttgacaagttcattcgttct
aatacctttctcgatgcggaaacgcgcattggtaatcgacttttcttaaataaccgtctc
gacgcccttagtcataatcaggcgatgctcgcccatggggtgatttatttattagagatg
gatgatctggatttactgcagcaatcccaaggtgaagcggtaaccaaagagttattaaac
tcgactgttaacgcgataagccaattactgcaaacccaagccaacagtatttttgcccgt
cgttcccacaatcaatttgccatagtcgtgccgcaaatctcgttaatcgaagccgaccaa
tttgccagtaagttacttaagatatgtttgagccagcctttacccgaagtcgagaatagc
gataactttttccacctcggatgcgcttattttaccgccggcgacaatgcggcgcagtta
attgaagaagccgatatggctttgagggcggcacaattacagggtaacagtaattggttt
atgtacgacaaaggcgcaattgatgaagagtttgctaaaggctcagtacgttggcgcagc
tttttagaaaacgcgttagtgcaaaggcgattcttcccctttagccagcctataatcgat
tctgatggtcatgagcatcataaagagatatttactcgggcgcgggataatcaaggagcg
ctaattcgtgccacactgtttattccaatggcgaataaatgtggtttaatgccgcaggtc
gaacggcaaattattgagcgggtattgttgttactgtcgaatgaattagcgggtggcgta
tcgaatactcaaacaaataaaaaaccagcgtcacagatatacagtattaatctgagtttg
gattcgctaatgagtcgagcttttacccaatggctaaaaacgacgctgttagaatatcgc
catctgaccacgcgactgattttcgaagtgtcggaagatatcgtgattcaacatcaagaa
aagttgcagcctaaattagatatgatccgtaaaatgggcgcgagattatgtgttgatcat
gtgggtcagcaggtcgttggcacttactatatccgtgaatgtcattttgatttaattaag
ctacatagatcgattgtgcggcatattcatttacgcccagaaaaccaattattcatccgt
agcttgattggcggtctgtatcgaacggaagtgcaagtctgtgccgagggggtcgaagtc
ttcgaagaatggcagacactgcaaatcctcggtgttggcgctgcgcagggaatgtatttc
agcgaacccatagaggctaagtaa
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