Shewanella baltica BA175: Sbal175_0733
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Entry
Sbal175_0733 CDS
T02014
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sbal175_0733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbb03019
]
Sbal175_0733
03110 Chaperones and folding catalysts [BR:
sbb03110
]
Sbal175_0733
03029 Mitochondrial biogenesis [BR:
sbb03029
]
Sbal175_0733
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbb04147
]
Sbal175_0733
Enzymes [BR:
sbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Sbal175_0733
Messenger RNA biogenesis [BR:
sbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Sbal175_0733
Chaperones and folding catalysts [BR:
sbb03110
]
Heat shock proteins
HSP60 / Chaperonin
Sbal175_0733
Mitochondrial biogenesis [BR:
sbb03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Sbal175_0733
Exosome [BR:
sbb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Sbal175_0733
Exosomal proteins of other body fluids (saliva and urine)
Sbal175_0733
Exosomal proteins of breast cancer cells
Sbal175_0733
Exosomal proteins of colorectal cancer cells
Sbal175_0733
Exosomal proteins of bladder cancer cells
Sbal175_0733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF5891
Motif
Other DBs
NCBI-ProteinID:
AEG10016
LinkDB
All DBs
Position
883871..885508
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVVFGNDARIRMLAGVNILANAVKVTLGPKGRHVVLDKSFGSPLITKDGVSVAREI
ELTDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKNLSQECVDSKAIAQVATISANSDESIGEIIATAMEKVGKAGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINTPETGCIELDHPFVLLVDKKISNIRELLPILESL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGERRKAMLQDVAILTGGTV
IAEEIGLELEKVTLEELGTAKRVVITKDNTTIIDGNGEQTQIAERISQIKQQIEVATSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVDDALHATRAAVEEGVVPGGGVALI
RVASKIADVEVLNEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNA
SNDTYGDMLEMGILDPTKVTRCALQFAASIAGMMITTEAMVAEIPQNASQDMGGMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttgtatttggtaacgacgctcgcataagaatgctggctggcgta
aatattctcgcaaatgcagttaaagtgaccttaggccctaaaggccgtcacgtggtacta
gacaagagtttcggttcaccactgatcactaaagacggggtgtcggtagcaagagaaatt
gaactgacagataagttcgaaaacatgggcgcacaaatggtgaaagaagttgcttctaaa
gccaacgacgccgccggtgatggtactactactgcaactgtactggctcaagccattgta
actgaaggcttaaaagccgttgcagccggtatgaatccaatggacctgaagcgcggtatc
gacaaagccgttattgctgccgttgctgagctgaaaaatctatctcaagaatgtgttgat
tcaaaagcgattgcccaagttgccactatctctgcaaactctgacgagtctatcggcgaa
attatcgcgactgcgatggaaaaagtcggtaaggcaggtgtgatcacagttgaagaaggc
caagcactggaaaatgaattggacgtagtagaaggtatgcagtttgaccgtggctacctg
tctccatacttcatcaacacgccagaaaccggctgcatagaattagatcacccattcgta
ctgttagtagacaagaaaatctctaacattcgcgaactgttacctatccttgaaagtctg
gcaaaaaccggtaagccattgcttatcgttgctgaagacgttgaaggcgaagcattagca
accttagttgtgaacaatatgcgcggtattgtgaaagtggctgccgttaaagccccgggc
tttggcgaacgtcgtaaggcaatgctacaagacgtagcaatcctgactggcggtactgtt
attgctgaagaaatcggcctagagcttgaaaaagtaacgctagaggaattaggtacagct
aagcgtgttgtgatcactaaagacaacactaccatcatcgatggtaacggcgagcaaaca
caaattgctgaacgtataagccaaatcaagcaacaaattgaagttgcgacgtcagactac
gacaaagaaaaactgcaagagcgtatggctaaactagctggcggcgtagcagtgattaaa
gttggtgcagcgactgaagttgaaatgaaagagaaaaaagcccgcgttgatgatgctctg
catgcaactcgcgctgcggtagaagaaggcgtggtgcctggcggcggtgttgctctgatt
cgtgtagcctctaagatcgctgacgttgaagtattaaacgaagaccaaaaacacggtgtg
gttatcgcactgcgtgcaatggaagcgccactgcgtcaaatcgccactaacgcgggtgaa
gaagcgtcagttgttgctaacacagtgaagaacggcagcggtaacttcggttataacgct
agtaacgacacttatggtgacatgttagaaatgggtatccttgacccaactaaagtgacc
cgttgtgcattgcaattcgctgcgtcaatcgcaggtatgatgatcactacagaagctatg
gttgctgaaattccacaaaatgctagccaagatatgggcggtatgggtggcatgggcgga
atgggcggcatgatgtaa
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