Shewanella baltica BA175: Sbal175_0938
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Entry
Sbal175_0938 CDS
T02014
Name
(GenBank) ErfK/YbiS/YcfS/YnhG family protein
KO
K19235
L,D-transpeptidase YbiS
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbb01002
]
Sbal175_0938
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbb01011
]
Sbal175_0938
Peptidases and inhibitors [BR:
sbb01002
]
Cysteine peptidases
Family C82
Sbal175_0938
Peptidoglycan biosynthesis and degradation proteins [BR:
sbb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Sbal175_0938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
LysM2_CERK1_LYK3_4_5
Motif
Other DBs
NCBI-ProteinID:
AEG10218
LinkDB
All DBs
Position
complement(1125480..1126394)
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AA seq
304 aa
AA seq
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MSMLRTTALLLTLVFPSLSALATEYPLPAAQSRLIGENQYYTVPEGKHTLEDIAAKYQLG
LSNLLEANPGVDPFLPKPGSQLLIPLQLILPNAPREGIVINVAEMRLYYYPKGKKTVEVL
PIGIGQIGKDTPENWVTSVQRKRANPTWTPTPRIRKEYAAKGEILPAVWPAGPDNPMGLY
ALYIGNLYAIHGTNASFGIGLRVSQGCVRLRHEDIEHLFKNVPVGTRVQFVNQPIKATEE
PDGKRYLAVHQPLSRTVAEFESNEPVAISLPRDIAKFIAKADTNSSVIKKLLDERTGVPM
RINQ
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcttcgcaccacagctttattattgactttggttttccctagtctgtccgct
ttagcaacggaatatcctttaccagccgcccaaagcaggctaattggcgagaaccagtat
tatacggttccagagggtaaacacactctcgaagatattgctgccaaataccagctcggt
ctcagtaacttactcgaagctaacccaggtgtagatccatttctgccaaagccaggtagc
caactgttaattccattacaactgatcctgcctaacgctccccgtgaaggcatagtgatc
aacgtggccgaaatgcgtttgtactactatccaaaaggcaaaaagacagttgaagtcctg
cctattggtattggccagattggtaaagacacgccagaaaactgggtgacctcagtacaa
cgtaagcgtgccaatccaacttggacaccgacaccgcgcattcgtaaagaatatgctgct
aagggtgaaatcctgccagcagtatggccagcgggtccagacaaccctatgggactgtat
gcgctgtatatcggcaacttgtatgcgattcacggtactaacgcgagtttcggtatcggt
ttacgtgtgagccaaggttgtgtgcgtttacgccatgaagatatcgagcacttgttcaag
aatgtcccagtgggcacccgcgtacaattcgtgaaccagccgattaaagcaaccgaagag
ccagacggtaagcgctacttagccgtgcatcaacctctgtctcgcactgtggctgagttt
gaatccaatgagccagtcgcgatttcattacctagagatatcgccaagtttatcgctaaa
gctgacactaattcttctgtgatcaaaaagctgctcgatgaacgtaccggtgtgccgatg
cgaattaatcaataa
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