Shewanella baltica BA175: Sbal175_1129
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Entry
Sbal175_1129 CDS
T02014
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbb03016
]
Sbal175_1129
Enzymes [BR:
sbb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sbal175_1129
Transfer RNA biogenesis [BR:
sbb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sbal175_1129
Prokaryotic type
Sbal175_1129
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AEG10406
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All DBs
Position
1341180..1342145
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AA seq
321 aa
AA seq
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MARRPKGRFIDGIVLLDKSTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
GTKFSQHLLDADKRYLVTAKLGERTDTSDSDGEVVQTRAIDFTEAQLLTALDFFRGETQQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFIGLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAQYPYTRMVSLEQLEALVAQAHEQQIDPSILLDPLL
LPMDTAVADFPEVNVPDAIAPYLMQGQAVRVPVNADLKTDELVRITLGDIRRFVGIGTMN
EDGLLAPKRLIVIHDEPAETD
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtccaaaaggtcgttttatcgatgggatagtgctgctggataaatccact
ggcatgagttctaactttgctttgcaaagggtaaagcgcttttttaatgcgaacaaagca
gggcatacgggcgcacttgatccgttagcgacaggtatgctacctgtgtgcttaggcgaa
gggactaagttttcccagcatctgttagatgccgataaacgctatttagttaccgcaaag
ctgggcgagcgaacggataccagtgattccgatggcgaagtggtgcaaacccgcgccatt
gattttactgaagcgcagttattaactgcgcttgatttcttccgtggtgagactcagcaa
gtgccttctatgtattccgcgcttaaatatcagggccagcccctgtataaatatgcccgt
gaaggcattgaagtgccgcgcgaatctcgccctattacggtatttgagcttaatttcatc
ggtcttgaaggcgatgagctgaccttagacattcattgttctaagggcacttatattcgc
actatcatagacgatctcggtgaaatgctcggttgtggcgcccatgtcattatgttgcgt
cgcactcaagttgcacaatatccctatacaagaatggtgtccttagaacaacttgaagcg
cttgttgctcaagcacatgaacaacagatagatccgagtatacttcttgatccgctgtta
ttacctatggatacggctgtggccgatttccctgaggtgaatgtgccagatgcaatcgcc
ccttacttaatgcaaggtcaggctgttcgggtccccgttaatgcagacttgaaaaccgat
gaactggtgcgtatcactttaggtgacattcgccgatttgtggggattggcacgatgaac
gaagacggcctactcgcgccaaaacgactcatagtgatccatgacgagcctgcagaaact
gattag
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