Shewanella baltica BA175: Sbal175_1229
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Entry
Sbal175_1229 CDS
T02014
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbb03016
]
Sbal175_1229
Enzymes [BR:
sbb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Sbal175_1229
Transfer RNA biogenesis [BR:
sbb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sbal175_1229
Prokaryotic type
Sbal175_1229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AEG10506
LinkDB
All DBs
Position
1471119..1472252
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AA seq
377 aa
AA seq
DB search
MSELHYLYGKPLGTADLRTQNSDFIVKEILPFSPTGEGEHHMLHVRKEGLNTVQVAEMIA
KFAKVHPKEVTYAGQKDKNAITEQWFGVRIPGKETPLWKDLNSERLTILSSSRHSKKLRI
GALVGNRFILTLRNVTQVEDIISRIEKVAQVGVPNYFGEQRFGHDGKNLVFGRQMMAGKK
VKDRNKRSMYLSAVRSNLFNTVVSYRLANHGTKPLAGDCVMLAGSKSFFVTPEWDLIVLK
RLIEKDIQLSAPLWGRGMMLPQGEAAAVETLAMSELADDCYGLEHAGLEQERRPLLLEPQ
ALKYEQTADGLVLEFVLPAGSFATSLLRELVNYQDVKEQQWQATLVQEPAPEATNVNVAA
NTIETKTEAAPNIEAES
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaattacattatctgtatggcaagcctttaggtacagcagatttgagaacccaa
aatagcgattttatcgtgaaagagattttaccttttagcccaacgggtgaaggtgaacat
cacatgctgcatgtacgcaaagaagggctaaatacagtacaagtcgctgaaatgatcgct
aagttcgctaaggtgcatccgaaggaagtgacctacgctgggcagaaagataaaaatgcc
atcacagaacaatggttcggtgtgcgtattccgggtaaagagacaccgctttggaaagat
ctcaatagcgaacgtttgaccatattgtcgagcagccgccacagcaaaaaactacgaatc
ggtgccttagtcggtaaccgttttattcttaccctgagaaatgtcacccaagtcgaagac
attatcagccgtatcgaaaaggtcgctcaagtgggtgttcccaattactttggtgagcaa
cgctttggtcacgatggcaaaaacttagtttttggtcgccaaatgatggcgggtaaaaaa
gtcaaagacagaaataagcgcagcatgtatttgtctgcggtgcgctcaaatctgtttaac
actgtagtgtcgtatcgtttagccaaccatggcactaagcctcttgcgggtgattgtgtg
atgttggcgggcagcaaaagcttcttcgttacgcctgaatgggatctcatcgtattgaaa
cgtctgattgaaaaagacattcaactatcagcaccattatggggccgcggcatgatgctg
cctcaaggtgaagctgctgcggtggaaaccttggccatgagtgagttggctgacgattgc
tatggccttgaacatgcgggattagaacaagagcgtcgtccgttactgcttgagccccaa
gcccttaaatacgaacaaaccgccgatggtctcgtgctggagtttgtgttgcctgcgggc
agttttgccacatccttgttgagagagttagtcaattatcaagatgttaaagagcagcaa
tggcaagcgacactggtgcaggagcctgcgccagaggcaacgaatgttaacgtagcggct
aatacaattgaaactaagactgaagctgcgcctaacattgaagcagagtcatga
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