Shewanella baltica BA175: Sbal175_2105
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Entry
Sbal175_2105 CDS
T02014
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sbal175_2105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_2105
Enzymes [BR:
sbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Sbal175_2105
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal175_2105
RecFOR pathway proteins
Sbal175_2105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
AAA_3
AAA_14
nSTAND3
AAA_22
Mg_chelatase
RNA_helicase
NB-ARC
Bac_DnaA
Rad17
AAA_17
AAA_24
AAA_18
NTPase_1
DUF815
TsaE
AAA_25
NPHP3_N
AAA_11
NACHT
IstB_IS21
ABC_tran
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AEG11369
LinkDB
All DBs
Position
2490806..2491810
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIQPQIQAQDESIDRAMRPKMLDEYTGQDDTRAQLKVFIQAAKNRNEALDHMLI
YGPPGLGKTTLAMIVANEMGVNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGALTSPLRARFGIPLR
LEFYNIKDLSTIVTRSAQVMELDIDAEGAFEIARRSRGTPRIANRLLRRVRDYAQVKHDG
AVTKFVAEHALDLLDVDSEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETIEDV
LEPFLIQQGFIQRTPRGRIATARAYQHFELIKPE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggcagacagactcatccagccgcagatccaagctcaagatgaatccatcgac
agggcaatgcgccctaaaatgctcgatgaatacacgggccaagatgacactcgggcgcag
cttaaggtgtttattcaagcagcgaagaatcgcaacgaagccttagatcatatgttgatc
tatggtccgccgggattgggtaaaaccaccttagccatgattgttgcgaacgagatggga
gtgaacattaagtccacctcgggccctgtgcttgaaaaagcgggggatctggcagctctc
ctgaccaatcttgaatccggtgatgtgttattcatcgatgaaatccaccgattaagccct
gtggtggaagagattttgtatccggcgatggaagattatcagcttgatatcatgattggt
gaaggacctgcggcgcgttctatcaagcttgatttaccgccgttcactctagtgggcgcg
acaacacgggcaggggcgttaacctcaccacttcgggcgcgttttgggatcccactgcgg
cttgagttctataacatcaaagatttaagcaccatagtcacgcgttcggcgcaggtaatg
gagctggatattgatgccgaaggcgcatttgaaatcgcacgccgttcacgcggcacaccg
cgaatagctaaccgattgctgcgccgcgtacgggattacgcgcaggtgaagcatgacggc
gctgtcaccaaatttgtggccgaacacgctttagacttgttagatgtggatagtgaaggt
ttcgattatatggaccgcaagctattactggccattatcgataagtttatgggcgggccc
gttgggctagataacttagccgcggccataggcgaagaacgtgaaaccatcgaagatgtg
ttagaacctttcttgatccaacaagggtttatccaacgtacgccccgcggccgaattgca
accgcacgggcataccagcattttgagttgatcaaacccgaatag
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