Shewanella baltica BA175: Sbal175_2129
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Entry
Sbal175_2129 CDS
T02014
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbb03032
]
Sbal175_2129
03036 Chromosome and associated proteins [BR:
sbb03036
]
Sbal175_2129
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_2129
DNA replication proteins [BR:
sbb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Sbal175_2129
Chromosome and associated proteins [BR:
sbb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Sbal175_2129
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Sbal175_2129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_2
HU-CCDC81_euk_1
ThiS
Motif
Other DBs
NCBI-ProteinID:
AEG11393
LinkDB
All DBs
Position
2524022..2524309
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AA seq
95 aa
AA seq
DB search
MTKSELIEKLATRQSQLSAKEVEGAIKEMLEQMATTLESGDRIEIRGFGSFSLHYRAPRT
GRNPKTGSSVDLEGKYVPHFKPGKELRERVDAVNV
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaatctgaacttatcgaaaaactcgccaccaggcagtcgcagctgtcggcgaaa
gaggttgaaggcgcaatcaaagaaatgttggagcaaatggcaacaacattagaaagcggt
gatcgtattgagatccgtggctttggtagtttctcgcttcactatcgtgcaccgcggact
ggccgtaatccaaagactggttcatcagtcgatttggaaggtaaatacgtcccgcacttt
aagccaggcaaagaactgcgcgagcgtgttgacgccgttaatgtgtga
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