Shewanella baltica BA175: Sbal175_2328
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Entry
Sbal175_2328 CDS
T02014
Name
(GenBank) exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sbal175_2328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_2328
Enzymes [BR:
sbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sbal175_2328
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal175_2328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AEG11581
LinkDB
All DBs
Position
2748447..2752259
Genome browser
AA seq
1270 aa
AA seq
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MLKLIQSNQMEVLCAHLAAYLTQPLAFARLLSNEHILVQSPGMSTWLRLEIAKQNGIAAA
LEFPLPSSFTWQLCHDLLPDVPKDNAFTKAAMTWKLMQLLPRMLQDDAFGPLRHYLGNTL
ENTPTINTADTSEHLNTSDMTADDIKLYQLCGRIADIFDQYLVYRPDWILAWEQNEHPDS
LTKPLNDDQRWQPILWRALIAFNRDELNQSHYHRANLHSDLIAALNNPDTLLAKLPQRLF
VFGISSMAPQTLEVLYHLAGRIDVIVLGLSPCQHYWGDIVDPRNRARMAVQYAGKRQLAE
LWEDKLEVGNPLLANNGKMGRELLDMLLELPAEHCDFGDDVYCEPCDDPNSPHSHASMLH
GVQYDILEMQTLDRVLGPDAELYQNVENRRLLKRDDESIRVKSCHSPLREVETLHDHLLE
LLSNDVDLTPKDIVVMMPDVAAYAPYIDAVFSAKQGLHYIPYAIADRGAAQESPLINSFL
NLLGINQSRFGLTDILSILEVPAILRRFQLDDDELQLIRRWLDEAGVRWGRDEQSRLKQG
VPAFEQNSWAFGIKRLILGYALSDDAPLYQDHLIVTGIEGQSAQALGKLLNFIEVLDETA
QILALPQVGALRLAELTELLDAFYDTDEDEREQLQEIRDAIAALEQELLSAGKPLDTNSL
DTSMFVTLAQQNISGLSLSIEVLQQWFNQRLTESRVGQRYLAGSVNFCTLMPMRSIPFKI
VCLLGMNDGVYPRVQHPVGFDLMAHFGARKGDRSRRLDDRYLFLEALLSAREQLYISYIG
RSERDNSERIASMLVSELIEYCQLCYLPETLLAQSQNASSPIDPEDAEKALYNAIVSHQP
LQPFDPKLYQAAVKSDDENSSNIDGSSISKNESGIGQSYSQQWCPPNAAAAGTHAGRFIG
AQTRIMLEADEQDSMPDTEAQPASVREQQQSKQVDVSALIRFFRNPAQYFFNRTLKVDLS
LNIQADDNDEPFSLNALERYMLQAQLLDDAIGQGLTEPDIELIKRLKASGSLPMQPFDDL
LLRQYQHDIKPLIGRTLFLKGEQASSHADIKLVFDLPITAGKSQQVLLQGRIDDISPKGL
VNYRPGSAHGRDVLRLYLRHLCLMAMGHTHASYLLDMGHFHALAPITAERAHALLADLLV
LFYQGQQYPLCFMPRTSLAYVSCEGEHDERLQQALPEWLDEQSQLGEGNEPHYQRLFSFP
RDFPENSFGALAERIYRPMVSLYLKDTLAQLEEFALNDGMTQGQTPDVQATETQATAVHL
NHHSAQGEQA
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgctaaagttaatccagtccaatcagatggaagtgctctgcgcccatttagccgcttac
ctgacccagccccttgcttttgcacgtctactgagtaacgagcatattttggtgcagagt
cccggcatgtcgacttggctgcgtctcgaaatcgccaaacaaaatgggattgccgccgca
ttggaattcccactgccgtcgagctttacctggcagttgtgccatgacttattacccgat
gtgcccaaggacaacgccttcactaaggcggcgatgacgtggaagctgatgcaactcttg
ccgcgcatgttacaagatgacgcctttgggccattgagacactatctaggtaatacccta
gaaaatacgcccaccataaataccgccgacacgagtgaacatctcaacaccagtgatatg
acggctgacgatattaagctgtaccaactctgtggccgtattgccgatatcttcgaccaa
tacttagtgtatcggcccgattggattttagcatgggagcaaaacgagcatcccgactca
ctcaccaagccgctgaatgatgaccaacgctggcaacccattttatggcgcgcgctcatt
gcctttaaccgcgatgagcttaatcaaagccattaccacagggccaatctacacagcgac
ttgattgccgcgctgaataatcccgacaccttactcgccaaattgccgcaacgcttattt
gtgtttggcatttcctcaatggcgccgcaaacccttgaggtactttaccatctggcaggc
cgcatcgatgtgatcgtgctgggtttaagcccgtgtcagcactattggggtgacattgtt
gatccccgtaatcgtgcccgcatggcggtgcaatatgcgggtaaacgccaattagccgaa
ctgtgggaagataaactcgaagtgggcaatccgctgcttgccaataacggcaagatgggc
cgtgaattactcgatatgctgcttgagctccccgccgaacactgcgactttggcgacgat
gtgtattgtgagccctgtgacgatcccaactcgccacacagtcatgccagcatgctccac
ggggtgcaatacgatattttagagatgcaaaccttagacagagtactagggcctgatgcc
gagctgtatcagaatgtcgagaacagacgcctgcttaagcgcgacgatgaatccattcga
gtcaagagttgtcacagtccactgcgggaagtcgaaaccctgcacgatcacttgcttgag
ttactcagcaatgatgtcgacctgacacccaaagacatagtggtcatgatgcccgatgtc
gccgcctacgcgccctacatcgatgccgtcttctcggcgaagcaaggcctgcattacatt
ccctacgcaattgccgaccgcggcgcggcgcaggaatcaccgctcatcaatagctttttg
aatttacttgggattaatcaaagtcgttttggtctgaccgacattttgagcatactcgaa
gtgcccgccattttgcgccgtttccagctcgatgacgatgaattgcaacttatccgccgc
tggttagatgaagcgggcgtgcgctggggccgcgatgagcaaagccgcctaaaacaaggt
gtgccagcgtttgagcaaaactcctgggcctttggtattaaaaggctgattttaggttac
gccttgagtgacgatgcgccgctgtaccaagaccatctgatcgtgactggcatcgaaggc
caatcggcgcaggcgttaggtaagttactcaattttattgaagtactcgatgaaacggcg
caaatactcgccctgccgcaagtgggcgccctgcgtttggctgaattaactgagctgctg
gatgctttttacgacacagatgaagacgagcgcgaacaattgcaggaaatccgcgatgcc
attgccgccctagagcaagagttactatcggcgggtaagccattagatacaaactcgtta
gatacaagtatgttcgtgacactagcccaacagaacataagcggactgagcctcagtatc
gaagtgctgcagcaatggtttaatcaacgcttaaccgaatctcgggtcggccagcgttat
cttgcgggaagcgtgaacttttgtaccttgatgccgatgcgctcgatcccctttaagatc
gtgtgtttactcggcatgaacgatggggtttatcctagggttcaacatcccgtcggcttt
gatttaatggcacactttggtgcccgtaaaggcgatcgttcccgccgcctcgatgacaga
tatttgtttttagaagccttattgtcggcgcgcgagcaactgtatatcagctatatcggt
cgcagcgaacgggataactctgagcgtatcgcctctatgctcgtctctgaactgattgaa
tattgtcagctgtgctatttgcctgaaacgctattggctcaatcgcaaaacgcttcaagc
cccatagacccagaagatgctgaaaaagccctctataacgcgatcgtcagccaccagccg
ctgcaacccttcgatcctaagttgtatcaagccgcagtaaaaagtgatgacgaaaatagc
tcaaacatagatggctcaagcataagtaaaaatgagtcaggcataggccaaagttatagc
cagcaatggtgtccgcccaatgcggcggcagcgggcacacatgctggccgctttatcggc
gcgcaaactcgcatcatgctcgaagcggatgagcaagactcaatgccagatacagaggca
cagcccgcttctgtgcgcgaacaacagcaaagcaagcaagtggatgtgtctgccctgatc
cgtttctttcgaaatccggcgcagtacttcttcaaccgaacgcttaaagtcgaccttagc
cttaatattcaggccgatgataatgacgagccctttagcctaaatgccctagagcgctat
atgttgcaggcccagttactcgacgatgccataggccaaggtctgactgagcccgatatc
gagctgattaaacgcctcaaagccagcggcagtttgccgatgcagccctttgatgatttg
ctgctacgccaatatcagcacgatattaagcctttgattggcagaaccttgttcctcaag
ggagaacaggccagcagtcatgcggatattaaactcgtgtttgacttgcccatcacggcg
ggtaaatcccagcaagtgttactgcaaggccgtattgatgacatcagccctaagggatta
gtgaattaccgtcccggtagcgcccacggccgcgatgtgctgagattataccttcgccac
ctgtgtttaatggcaatgggccacacacatgcaagctatcttctcgacatggggcatttc
cacgccttagcgccaatcactgctgagcgcgcccatgcgttactggcagatttgctggtg
ctgttttatcaaggtcagcaatacccactgtgttttatgccgcgcacctcactggcctac
gtcagctgcgaaggtgagcacgatgagcgtttgcagcaagcgttacctgaatggctggat
gagcagagtcaattgggtgaagggaacgagccccattaccaacgcttattcagttttccg
cgggatttccctgagaatagctttggcgcattagccgagcgcatctatcgccctatggtg
agtttatatctcaaagatacgctggctcagcttgaggaatttgcgctgaacgatggcatg
acccaaggccagactcccgatgtacaagcgactgaaacacaagcgactgcagtacattta
aaccatcatagcgcacagggagagcaagcatga
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