Shewanella baltica BA175: Sbal175_2330
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Entry
Sbal175_2330 CDS
T02014
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Sbal175_2330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_2330
Enzymes [BR:
sbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Sbal175_2330
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal175_2330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
Viral_helicase1
UvrD_C_2
AAA_11
SH3_13
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
SLFN-g3_helicase
TraI_hel_assoc_N
AAA_28
PhoH
UvrD_C
AAA_16
DEAD
nSTAND3
SRP54
PIF1
ResIII
NTPase_1
TrwB_AAD_bind
Flavi_DEAD
TMEM82
NACHT
Motif
Other DBs
NCBI-ProteinID:
AEG11583
LinkDB
All DBs
Position
2756074..2758287
Genome browser
AA seq
737 aa
AA seq
DB search
MMRSTQGLNAHSLTAAKWIDHGEIQLSAPLPELFKLWEQERLLTPLDRHFALEMSHLHPS
DSQQPLFILLCALLSQQLSSQHSCLVLAHIVPLNPMAEQNSHCKITLSLEALTETLQTFD
AVGQAGSNKPLIFDNGRLYLQRYYQFETSVAAALIRLSGSVSRQLSEEANNQEQPQIAKL
RSLLDQLFPANVLAPHALTTNVLTKSEDTAPIDWQKVATATALGKKLSVITGGPGTGKTT
TVTKLLLLLQMESQQEIRLVAPTGKAAARLSESIKASKARLAKELSAHTDVVDEARNRHS
QDFLTALGRIPEEASTLHRLLGVIPNSPHFRHHQGNPLRLDLLIVDEASMVDLPMMYKLL
SALPEHASLILLGDQDQLASVEAGAVLADICAGLKMPVAPNNLAQNNIASNSQALWQMRY
SKEQAERLSALTGFELTLFINDAPKLGDSLCMLMHSHRFKGDAGIGLLASAVNRADLQGI
LQVWQQGPAELKWLEHSMVVSQTQAKVSEPANNLGLNLLLEQACQQYGAYLRALNSHASN
NDVNNSDVGTRPSTADIIDSFNQYRILCAMRSGDYGVEGINQFVTQALANAKLIKPLQEF
YLGRPIIIQSNDYNLGLFNGDIGLILQDEDKPERLMAHFIKADGSLLKVLPARLPSHETC
YAMTVHKSQGSEFSRVALVLPPSPSLAQWQLLTKELVYTAITRAKVHFTCLGTQHVFERA
SSQATQRASGLADRLWG
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgctctactcaagggctaaacgcacattcactcacagccgcgaaatggatagac
catggcgaaatccagcttagcgcgccgctaccagagctgtttaaactgtgggagcaggaa
cgactgctcacaccgctcgatcggcatttcgcactcgagatgagccacttgcatccaagc
gacagccaacaacccttgtttattttgctatgtgcgctgttgagccagcaattatcttca
cagcacagctgcctagtgctcgcccatatcgtgccgcttaatcccatggccgagcaaaat
agccattgtaaaatcaccttaagcctagaagcgctcacagagactttgcaaacctttgat
gccgtcggccaagcaggaagcaacaaaccacttatttttgataatggcagactctatcta
caacgttattatcaatttgaaacctcagtggccgctgctttaattcgcttgtccggaagc
gtatctaggcaattatctgaagaagcaaacaaccaagagcaaccgcaaatcgctaagttg
aggtcactgctagatcaactgttccctgccaatgtgctcgcgccccatgcactcactacc
aatgtactcactaaaagtgaagacacagcacccattgattggcaaaaggtcgccaccgcc
acagcgctgggtaaaaaactgtcggtgatcactggcggcccaggtacgggcaaaaccacc
actgtaactaaacttttgttattgctacaaatggaatcacaacaggaaatccgtttagtc
gcgccaacgggaaaagcggcggctcgattaagcgaatcgatcaaagcttcaaaagcgcgt
ctagcgaaggaactcagcgcccatactgatgttgttgatgaagctcgcaatagacatagc
caagattttttaacggcactggggcgcattccagaggaagcatcaaccttacacagactg
cttggggtgatccccaattcgccgcactttcgccaccatcaaggtaatccgcttaggctc
gacttattgatcgtcgatgaagcctctatggtcgatttgcccatgatgtataaattgctc
agcgccttgcccgagcacgccagtttgattttacttggcgatcaggaccaactcgcctcg
gttgaggctggcgctgtgctcgccgatatttgtgctggcctgaaaatgccagtagctccc
aataacctcgcgcaaaataacatagcgtcaaacagccaagctctgtggcaaatgcgctat
tccaaggagcaagccgagcgcctgagcgctttaacgggttttgagttaacgctctttatc
aacgatgcccctaaacttggcgatagcttatgtatgctgatgcacagccacagatttaaa
ggcgatgcggggattggactgcttgctagcgccgtcaatcgcgcggatcttcaaggcata
ttgcaggtatggcaacaaggccctgctgaattgaagtggttagaacacagcatggtcgta
agccaaacccaagccaaagtgagcgagccggctaataatctgggactcaatttactgcta
gagcaagcctgccaacaatatggcgcctatctcagagccttgaatagccatgcaagtaac
aatgatgtaaataatagtgatgtaggcacacgtccaagcacggctgacatcatagatagc
tttaaccagtaccgcattctatgcgccatgcgctcgggcgattatggggtcgaaggcatc
aatcaatttgtgactcaagcactggccaatgccaagctgattaaaccgctgcaggagttt
tatctgggtcggccgattatcatccaaagcaatgactataacttaggcctgtttaacggt
gatatcggattgattttgcaggatgaagataaacccgaacgcttaatggcgcactttatc
aaggccgatggcagcctgttaaaagtcttgccagcacgtttacctagccatgaaacctgt
tacgccatgacagtacacaaaagccaaggcagtgagttcagccgtgtggccttagtactg
ccaccgagccccagcctagcgcagtggcaactgctgaccaaagagttggtctacaccgcc
attacccgcgctaaagtgcactttacctgcttaggcacccagcacgtattcgagcgggcc
agtagccaagcaacccaacgcgcatcgggtcttgcagacaggctttggggttaa
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