Shewanella baltica BA175: Sbal175_2591
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Entry
Sbal175_2591 CDS
T02014
Name
(GenBank) type III restriction protein res subunit
KO
K19789
DNA repair protein RadD
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_2591
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
Sbal175_2591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
DUF7577
AAA_22
AAA_16
SLFN-g3_helicase
T1R_D3-like
ERCC3_RAD25_C
Zn_ribbon_3
zf-tcix
Helicase_C_2
AAA
DZR
SNF2-rel_dom
DUF3638
DUF3530
DZR_2
Motif
Other DBs
NCBI-ProteinID:
AEG11842
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Position
3064135..3065889
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AA seq
584 aa
AA seq
DB search
MSVKLRDYQQQAVNAAIAHFRQSQASAVLVLPTGAGKSIVIAELARIAKGRVLVLTHVKE
LVAQNAEKVGLLTAQASIYAAGLNQKATEGKTVVASIQSAARGLTQFDQPFSLVIIDECH
RVSLEKTSQYQQVLNHLRTKNPQLRLLGLTATPYRLGTGWIYQQHYHGKVGSPEHAVFEH
CVFELPIRPLIKQGYLTAPTLFDGLSAQYDFSQLKANENGEYAEAEVNDLLGHYGRATTA
IVKQLIELSQHRRGIIIFAATVRHANEIFGLLNQAHAAQSAIITAQTHDNERDATIERFK
AQELKFLVNVAVLTTGFDAPHVDLIAILRPTASVSLFQQMIGRGLRIAEGKKDCLIIDYA
ANGYDLYFPEVGQAKPNSKSVPVQVHCPVCDFANIFWGLTDDDGDIIEHFGRRCQGIVEQ
QGKKLQCDFRFRSKSCPDCGEENDIAARICQHCQSTLIDPDKRLRQVLSQQHHHLFRCQH
MTLIDDDGNLKVQYLDIDGNEFNRRFKLQTPAQWRALYALFIFSHSRTPGLKPKKYTKVA
ELISDVDKFRMPDLLLLKKHKKGWDLLESYFDYQGRYQTENKLG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagtcaaactcagagactatcaacagcaagcggttaatgccgccatcgcccatttt
aggcaaagccaagcttccgccgtacttgtattgcccacaggcgccggcaaaagcatagtg
atcgccgaactggcgcgcatcgccaaaggcagagtcttagtactcacccacgtgaaagaa
ttagtcgcgcaaaatgctgagaaagtcggcctactcacggcacaagccagtatctatgcg
gcgggactcaatcaaaaagccactgaggggaaaaccgtcgtcgccagcattcaatcggca
gcgcggggattaacgcagttcgatcagccgttctcgttagtcattattgatgaatgccac
agagtcagccttgagaaaaccagccagtatcagcaagtgctcaatcatttacgcactaaa
aacccccaattaagattgctcggtctcaccgctacgccctatcgccttggcactggctgg
atttaccagcaacactatcacggcaaagtgggttcgcccgaacacgccgtgttcgaacat
tgtgtgttcgagctgcccatcagaccactcattaaacaaggttacctcacagcaccaacg
ctgtttgatggcctcagtgcccagtacgatttcagccaactgaaagcaaacgaaaatggc
gagtatgctgaagccgaggttaacgatttactggggcattacggccgcgcgactaccgcg
atagtgaaacagctcattgaactgagccaacatagaagaggcattatcatcttcgcggca
acggtgcgtcacgccaatgagatttttggcctactcaaccaagctcacgctgcacagagc
gccattatcacggcacaaacgcacgacaatgaacgtgatgcgacgattgaacgctttaaa
gcccaagagcttaagtttttggtcaacgtggctgtgttgacgacaggcttcgacgcgccc
catgtggatttgattgcgattttgcgcccaaccgcctcagtcagtctttttcaacaaatg
atcggccgtggtttacgaatcgctgaaggtaaaaaagattgtcttatcatcgactatgct
gccaatggttatgacttgtatttccccgaggtcggccaagcgaaacccaacagtaaatcg
gtacccgtgcaagtgcattgccctgtgtgcgattttgccaatattttctggggactcacg
gacgacgatggcgacatcattgaacactttggtcgccgttgtcagggcatagtcgaacag
caaggtaaaaagctacagtgcgactttcgatttagatctaaatcttgccctgattgcggt
gaagagaatgatattgccgcgcgcatttgccagcactgccaatcgactctcatcgatccc
gataaacgccttcgccaagtgctcagccagcagcaccatcatttgttccgctgccaacat
atgacgctaatcgacgatgacggcaatctgaaagtgcaatacctcgatatcgacggcaat
gaatttaatcgccgctttaaattgcaaacgccggcccagtggcgagccctatatgcctta
ttcatcttttcccatagccgtacaccgggattaaaaccaaaaaagtacactaaggtggca
gagttaatcagcgacgtggataaattccgcatgcccgatctcttgctactgaagaaacat
aaaaaaggctgggatctgctcgaaagctattttgattatcaaggccgctatcaaactgaa
aataaactcggctga
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