Shewanella baltica BA175: Sbal175_2685
Help
Entry
Sbal175_2685 CDS
T02014
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_2685
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Sbal175_2685
Archaeal homologous recombinant proteins
Sbal175_2685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AEG11932
UniProt:
G0ARZ1
LinkDB
All DBs
Position
complement(3164016..3167072)
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPLSLSMSAFGPFASTQALDFTALGTNPLFLINGPTGAGKTTLLDGICFALYGKTTGNE
REGSQMRCDMADDSLLTEVTFSFQLGSNSYRIRRVPEQERVKKSGDGSTVQKPEAQLFKI
DADGNESLLVASKVSEATAEIEALTGLDVEQFRQVMVLPQGKFRELLMADSKAREQIFSQ
LFQTHIYRRIEDTLKNKAADISGLVKEQRSRRDGILQSAGLASDDELSNELAKLTPELAL
AQSAKEQALQQQQLIIKASDAAQHLLAEFEQFDTLTQTAAALEAQQGSIVAQTHKLNLAK
QAQRLAPMVEVFLAREQEAKAANLAFSNAQTALTQAKQAFDDAELKAQDLPVLEASLLEQ
EQAKQQLNALGPQLRELNRLNKTLEQEQAQLVKAKTQLQISKNELTAVTQKRRVLESALP
PLQANSDTRLSLQQAHQQQQQLLSTYQQWQQVATRVSSTKEKLANAKAQGQQLNAEHQQA
QVAHKALLLTWHQGQAAILARQLQQDEPCPVCGSQTHPQPAQSQEPLPSDEVLQFAQDAE
TTAQEVLSKARAEYRGLQTQLETLQQQAQDLAAQLGTAVDISQDQHAHTLSQYAFSLTQA
EQAHQHLQQLQQEIVLLHAQETHLQQKLEQGQTHDSALQSKVDLLQGQLAHMQQSVPPAL
ATLEALTAAITQNQQQISQIKQQIADVRALQQQTGQTFVAAKAALNGAENTAEVALAQQT
RAQQQLNQQLVAAGFTDQQALFAAMLDEEQLHALASEIEAYQQRSALTKAQCEQLALRLK
DKVPPDSIKLAAELESAQQALYAAEQAWQLLHTRTVLLTQTQTQLSIADTKAKALDDEYA
VIGTLADVANGKTGNKISLQRFVLSVLLDDVLLEASHRLHLMSKGRYRLLRKEDRAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGF
GSLDQDSLELAIRTLMDLQSSGRMIGVISHVSEMKEQINTRIDINKTSHGSEMTIVLP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgagaccccttagcctttcaatgtcagccttcggcccctttgcatcgactcaggcactt
gattttacagctcttggaaccaatccgttatttcttatcaacgggcccacaggcgcgggc
aagacgaccttgctcgatggcatttgttttgcgctttatggcaaaaccacaggtaatgag
cgtgaaggtagccaaatgcgctgcgatatggccgacgatagtttactaacagaagtcact
ttcagttttcagctcggcagtaacagctatcgtattcgccgggtgccagagcaagaaaga
gttaagaaaagcggtgacggctcgacagtgcaaaagcctgaagcgcagctctttaaaatt
gacgccgatggcaatgaaagcttattagttgccagtaaagtgtccgaggccaccgctgag
attgaagctttgactgggctcgatgtggagcagtttcgccaagtgatggtattacctcag
ggtaagtttcgcgaattgttaatggcggattctaaggcgcgcgagcagatatttagtcag
ttatttcaaacgcatatctatcgccggattgaagataccttaaaaaataaggctgccgat
attagcggcttagtgaaagagcaacgcagccgccgcgatggtattttacaaagtgctggc
ctagcatccgatgacgagcttagcaatgaattagccaagctcacacctgaacttgcgctc
gctcaaagtgccaaggaacaagcattacagcagcaacaattaatcattaaagccagcgat
gccgcccagcatctactggctgaatttgagcagtttgataccttaactcaaaccgcagca
gcgctcgaggcgcagcaaggaagcatagtcgcgcaaacccataagctgaacttagctaaa
caagcgcagcgtttagcgcctatggttgaggtgtttttagcccgtgaacaagaagcaaaa
gccgccaatctcgcctttagcaatgcgcaaacggcactgactcaagctaagcaagccttt
gatgatgctgagctcaaagcgcaagacttacccgtattggaagcgtcgctactggagcag
gaacaagccaaacagcaactgaatgcgctagggccgcagcttagggaactgaatagactc
aataaaaccctcgagcaagagcaagcacagttagttaaagctaaaacacaacttcagatc
agtaaaaatgagttaaccgccgttacccaaaaacgccgtgtactggaatcggctttgcca
ccattgcaggccaatagcgacactcgtctctcattgcagcaggcgcaccagcagcaacag
cagttattgtcgacttatcagcaatggcaacaagtggcgacaagggtatcgtcgacaaag
gaaaaacttgccaatgcgaaagcgcaagggcaacaactcaatgccgagcatcagcaagca
caggttgcgcataaagccctattattgacttggcaccaaggacaggcagccattttagcg
cggcaattacagcaagatgaaccttgtcccgtctgtggcagccaaacccatccacaacca
gcacagagccaagagccactcccaagtgatgaagtgctgcaatttgcccaagacgctgaa
acgacggcccaagaagtcctgagcaaagccagagcggaatatcgcggattacagacacag
ttagaaaccttgcagcaacaagcgcaagatctcgcggcccaattgggtactgcggttgat
atttctcaagatcaacatgcgcataccttgtcgcaatatgctttttccctcacgcaagct
gagcaagctcatcaacatttgcagcagttacagcaagaaattgtcttgttgcacgcgcag
gaaacgcatctgcaacaaaagctggagcaaggacaaacacacgatagtgcgctgcaatct
aaagtggatttattgcaggggcagttggcgcacatgcagcaaagcgtcccacctgcgctt
gcaacgcttgaggcattaaccgctgctatcacgcaaaaccagcaacaaataagccagatt
aaacagcagattgctgacgtgagggcgcttcagcaacaaacagggcaaacctttgttgca
gctaaagcggcgcttaatggtgccgaaaataccgctgaggtggcattagctcagcaaacg
cgtgcccagcagcaactcaatcagcaattagtcgcagcgggatttaccgaccaacaggcc
ttatttgcggccatgctggatgaagagcaactgcatgcattagccagcgagattgaggct
taccagcagcgcagtgctttgaccaaggcgcagtgcgagcagttagcgctgaggctcaaa
gataaagtgccacccgatagcattaagctcgctgccgagcttgagtcggcacagcaagca
ttatacgcagcagagcaggcatggcagctgcttcatactcgcacagtactactgacccaa
actcaaacccagctcagtattgcagatacgaaagctaaggcgttagacgatgaatatgca
gttatcggcacgcttgccgatgtggcgaatgggaaaacaggcaataagatcagtttgcag
cgttttgtattaagcgtactgctcgacgatgtgttactcgaagcgagccataggctgcat
ctgatgagtaagggacgttatcgcttgctgcgcaaggaagatagagcaaagggcaacaag
gcgtctgggctcgagttagaagtggaagatgcctacacctcaaaagtgcgccctgtggca
accttaagcggcggcgaaagttttatggcggccttgtccatggcgttagggctatccgat
gtggtgcaagcttatgctggggggatcaaactcgacaccttatttatcgatgaaggcttt
ggcagtttagaccaagattcattggaattggcgattcgaaccttgatggatctgcagtct
tcgggccgcatgataggggtgatctcgcacgtttctgagatgaaagagcagataaatact
cgcatcgacatcaataaaacctcacatgggagcgaaatgacgatagttttgccttag
DBGET
integrated database retrieval system
