Shewanella baltica BA175: Sbal175_3082
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Entry
Sbal175_3082 CDS
T02014
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Sbal175_3082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbb03019
]
Sbal175_3082
03009 Ribosome biogenesis [BR:
sbb03009
]
Sbal175_3082
03036 Chromosome and associated proteins [BR:
sbb03036
]
Sbal175_3082
Enzymes [BR:
sbb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Sbal175_3082
Messenger RNA biogenesis [BR:
sbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Sbal175_3082
Ribosome biogenesis [BR:
sbb03009
]
Eukaryotic type
90S particles
RNase
Sbal175_3082
Prokaryotic type
rRNA processing factors
Sbal175_3082
Chromosome and associated proteins [BR:
sbb03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Sbal175_3082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
AEG12321
LinkDB
All DBs
Position
complement(3655557..3656237)
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AA seq
226 aa
AA seq
DB search
MEPIKNLPRLCRTLSYEFKNIELLTQALTHRSAANKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVRGDTLTIIAQEFKLGDYLYLGPGELKSGGFRRESILADAVEAI
IGAVYLDSDLEVCRALLLKWYAERLAEIQPGISQKDAKTLLQEHLQGFKKPLPDYQVINI
EGDAHDQTFTVECRIEDLSQSVIGVASSRRKAEQIAAAQVLELLKK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgattaaaaatttgccacgtttgtgtcgtactttaagttatgagttcaagaat
attgagctgttgactcaagcgctgacccacagaagtgcggcaaataaacacaatgaacgc
ttagagtttttaggtgattcaattttatctattgtgatttctgatgccttatatcatcag
tttccgaaggcgaccgaaggcgatttaagccggatgcgcgccaccttagtgcgcggtgat
accttaacgatcatcgcccaagaatttaagctcggcgattatttgtatctcggtcctggc
gaattaaaaagtggtggatttagacgcgagtcgattcttgccgatgcggttgaagccatt
attggcgccgtttaccttgattccgatctcgaagtttgccgtgcattactgctgaaatgg
tatgccgagcgtttggccgaaattcaacccgggatcagccagaaagacgcaaaaacatta
ctgcaagaacatttacaagggtttaaaaagccgctgcctgattaccaagtaatcaacata
gaaggcgatgcccacgatcagacatttaccgttgaatgtcgtattgaagacttgagccaa
agcgtcattggtgtggcgagttcacgccgtaaagccgagcaaatcgcggccgctcaagta
ttggagttactaaagaaatga
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