KEGG   Shewanella baltica BA175: Sbal175_3082
Entry
Sbal175_3082      CDS       T02014                                 
Name
(GenBank) Ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sbb  Shewanella baltica BA175
Pathway
sbb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sbb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    Sbal175_3082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbb03019]
    Sbal175_3082
   03009 Ribosome biogenesis [BR:sbb03009]
    Sbal175_3082
   03036 Chromosome and associated proteins [BR:sbb03036]
    Sbal175_3082
Enzymes [BR:sbb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     Sbal175_3082
Messenger RNA biogenesis [BR:sbb03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     Sbal175_3082
Ribosome biogenesis [BR:sbb03009]
 Eukaryotic type
  90S particles
   RNase
    Sbal175_3082
 Prokaryotic type
  rRNA processing factors
   Sbal175_3082
Chromosome and associated proteins [BR:sbb03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     Sbal175_3082
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: AEG12321
LinkDB
Position
complement(3655557..3656237)
AA seq 226 aa
MEPIKNLPRLCRTLSYEFKNIELLTQALTHRSAANKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVRGDTLTIIAQEFKLGDYLYLGPGELKSGGFRRESILADAVEAI
IGAVYLDSDLEVCRALLLKWYAERLAEIQPGISQKDAKTLLQEHLQGFKKPLPDYQVINI
EGDAHDQTFTVECRIEDLSQSVIGVASSRRKAEQIAAAQVLELLKK
NT seq 681 nt   +upstreamnt  +downstreamnt
atggaaccgattaaaaatttgccacgtttgtgtcgtactttaagttatgagttcaagaat
attgagctgttgactcaagcgctgacccacagaagtgcggcaaataaacacaatgaacgc
ttagagtttttaggtgattcaattttatctattgtgatttctgatgccttatatcatcag
tttccgaaggcgaccgaaggcgatttaagccggatgcgcgccaccttagtgcgcggtgat
accttaacgatcatcgcccaagaatttaagctcggcgattatttgtatctcggtcctggc
gaattaaaaagtggtggatttagacgcgagtcgattcttgccgatgcggttgaagccatt
attggcgccgtttaccttgattccgatctcgaagtttgccgtgcattactgctgaaatgg
tatgccgagcgtttggccgaaattcaacccgggatcagccagaaagacgcaaaaacatta
ctgcaagaacatttacaagggtttaaaaagccgctgcctgattaccaagtaatcaacata
gaaggcgatgcccacgatcagacatttaccgttgaatgtcgtattgaagacttgagccaa
agcgtcattggtgtggcgagttcacgccgtaaagccgagcaaatcgcggccgctcaagta
ttggagttactaaagaaatga

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