Shewanella baltica BA175: Sbal175_3433
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Entry
Sbal175_3433 CDS
T02014
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbb03009
]
Sbal175_3433
Enzymes [BR:
sbb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sbal175_3433
Ribosome biogenesis [BR:
sbb03009
]
Prokaryotic type
rRNA helicases
Sbal175_3433
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_11
AASDHPPT_N
Cas3-like_C_2
7TM_GPCR_Sra
Motif
Other DBs
NCBI-ProteinID:
AEG12667
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Position
4073506..4074765
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AA seq
419 aa
AA seq
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MQFEDFQLDPSLLESLNAMGHHSPTTIQQETIPYALEQRDILARAPTGTGKTASFLLPSL
QHLIDFPRRFAGQARILILTPTRELASQIHRYACHLATGQGLDIAIVTGGVPYGPQEEAL
AGNVDILVATPGRLMEYLDKGNFNAQEVDILIIDEADRMLDMGFSSVVQAIAIEAQGRKQ
NMLFSATLEGGGVQRFAREVLNDPIEIDVEAPRSEKAKIHQWIHLADDKEHKFALLCHLL
RQEDVKRTIVFVKTRDIVSSLEGQLLKVGIACAFMRGDMEQKKRFQALSRFTKGEVNVLL
ATDVAARGIDIDDITHVINFDMPRSADTYIHRIGRTGRAGAKGTAISLAEAHDMRIVGKI
ERYIEQPLKRRVIEELRPKNKEARTPGKKKAKVKAKEAAKKTSKKEAAKKASKIARKKK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgaagatttccagcttgaccctagcttattagagtcgcttaatgccatgggg
catcattcacccaccactattcagcaagaaactatcccttatgccctagagcaaagagat
attctcgcgcgcgccccgacaggaacaggtaaaacagcgagctttttactgccatcgctg
caacatttaatcgacttcccccgccgtttcgcagggcaagcacgtatcctgatcctcaca
ccaacccgtgagttagccagccaaatccaccgttatgcgtgtcacttagccacaggccaa
ggtttagacatagcgatcgtgactggtggtgtgccttacggaccacaagaagaagcctta
gcgggcaacgtcgatattctggtcgcgacccctggccgcctgatggaatatttagacaaa
ggcaatttcaacgcccaagaagtcgatatcttaattatcgacgaagccgaccgcatgcta
gacatgggcttctcttctgtggtgcaagcgattgctatcgaagcccaaggccgcaaacag
aacatgttgttctctgccaccttagaaggcggcggtgtacaacgttttgcccgtgaagta
ttgaacgatccgattgaaatcgatgttgaagcacctcgcagcgaaaaagccaagatccac
caatggatccacttagccgatgataaagagcataaatttgccctgttatgtcatctgctg
cgccaagaagatgttaaacggactatcgtgttcgtaaaaacccgcgacatcgtttctagc
ttagaaggccagttacttaaagtcggtattgcctgcgctttcatgcgtggcgatatggaa
cagaaaaaacgtttccaagctttgagccgctttaccaaaggtgaagtgaacgtcttactg
gcaaccgatgtggctgcacgcggtatcgatatcgacgatatcacccatgtgatcaacttc
gacatgccacgctctgccgatacctatattcaccgtatcggtcgtactggccgcgctggc
gcaaaaggtactgcgatttcgttggccgaagcacacgacatgcgtatcgtcggtaaaatc
gagcgttatatcgagcaaccgttgaaacgccgcgtgatcgaagagctgcgtccaaagaac
aaagaagcgcggacaccgggtaagaaaaaagccaaagtgaaagcgaaagaagcagcgaaa
aaaaccagcaagaaagaagcggcaaagaaagcgagtaaaatcgcccgcaagaagaagtaa
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