Shewanella baltica BA175: Sbal175_3699
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Entry
Sbal175_3699 CDS
T02014
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22051
miniconductance mechanosensitive channel
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbb02000
]
Sbal175_3699
Transporters [BR:
sbb02000
]
Other transporters
Pores ion channels [TC:
1
]
Sbal175_3699
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MscS_TM
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MscS_porin
Motif
Other DBs
NCBI-ProteinID:
AEG12925
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Position
4374930..4378148
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AA seq
1072 aa
AA seq
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MSLAHMPRILLFVIAFFSFSVLANSPLQLDKRLGMNKQDQQQNLSIDEQINDLKINIEKL
AASATSFQQAQIDFEQHKKRTNQALKEAYKPLSLEKGTDLSQQASMAYIRLSELKESEST
LGRQVNDLLQRHNDLPTVIASARQSVAQNKKAELAPLDTPTGELQQTQRLFFEQSLATNE
AELASSQKRIELTQLQLQLVRQQLVQQEALIETINKAINKQRQQQTDATLAKNLVNTGKV
VDPITRNIADTNQIYGQKLQTLTLQINNVVEQQEQSETQYQSQAKQLANIQEQITWVKMN
SAFGERFLQMLQSLPKPPNHEKLQTLIADARLDRYHLEQQQALNDQELEQPGLYNEQQIK
LLHSQQSLISQLMQSYDQYLSELGKLKVNYQQLSQQHLTLKNTLNEHLFWVPNAASISKL
WLTDLERSAVWLVQQAQWDELGKAWEEQNDYWSWWIILLVLCLVVQDLITPKFNRLLNHY
TTYVGNVTQDKFIYTLKALACSVSYALIKPFPVIMAGLIFYQSDRNFVQAVGMGILAIGL
VYLLYRFIFILTLDKGVLVGHFKRPSKLIQAGQSRLRHFVLVASPLLGLMGFTEVLDTSL
VRNSIGRGAFIVFCIVLFLLYKDILILSRKNSDAKKDGKNKKLIQKILWTLLISVPLLSA
GLAFRGYYFTAFQMLLQLQLSIVLGLGFLLLYQLIKRWMLIERRRIAFDRAKAKRAERLA
QREKGETHHLSADGLDTYEEPVVDLETISSQSLGLVRSLLLLAFLASLIGLWTQTHTALF
SFLDGITLWTTNTSVNGLEQQLPITMKSLMFGLIVVGFSLMIATNLPGLLELMILQRLDL
SPGTGFAITTVSRYLVVFLGLLIGFSNLGMEWSKLQWLIAALSLGLGFGLQEIFANFISG
LIILFEKPVRIGDTVTIRDLTGTVSKIQIRATTIIDWDRKEIIIPNKAFITEQLINWSLS
DPITRVIVYVSVARDSDPAKVEATLYQAVQECEDALASPEPEVWFAGFGKHTQDYEVRAY
AKDMSARWPLRHDLHKRVTKKLKENNLELAYPQMEIHIKNGQSREQQGIIRS
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcccatatgccacgtattttattgttcgttattgcttttttctcattttcc
gtcctagccaattcgcctttgcagttggacaaacgtcttggcatgaacaagcaagatcag
caacaaaacctcagcattgatgaacaaattaacgacctaaaaattaacatagagaagctc
gccgccagtgcgaccagtttccaacaggcgcagatcgattttgaacaacacaagaagcgc
accaaccaagcgctgaaagaagcctataaacctctctctctggaaaaaggcacagacctc
agccagcaagcttcgatggcctatattcgtttgtctgagcttaaagaaagcgaatcgacc
cttggccgacaagtaaacgatttattacagcgtcacaacgacttacccacagtgatcgcc
agcgcgaggcagagtgtcgcccaaaacaaaaaggctgaactcgccccacttgatactcca
acgggtgagttacaacaaactcaacgactcttctttgaacaaagccttgcgaccaatgag
gctgaactcgccagcagccaaaaacgcattgaactgacgcaattacaattacagctagta
cggcaacaactcgtgcagcaagaagccttgattgaaaccatcaataaggcgatcaataaa
caacgtcagcaacaaaccgatgccactttagccaaaaacttagtcaacacgggcaaagtc
gtcgatcctattacccgcaacattgccgacactaaccagatttatggccaaaaactgcaa
accttaaccttgcagatcaacaatgtggtcgagcaacaagagcagtcggaaacccaatat
caatcccaagccaaacagttggcaaatattcaagaacagatcacttgggtcaaaatgaac
tccgcctttggtgagcgctttttgcagatgttgcaatcgctgcctaagccgccaaaccac
gaaaaactgcaaaccctgatcgccgatgcgcgcttagacagataccatttagagcagcaa
caagccctcaatgatcaagagttagaacagcccggcttatacaatgagcagcagattaag
ctactgcactcgcagcaaagtttgatctcgcagctgatgcaaagctatgaccaatacttg
agtgaattaggcaaattgaaggtcaactatcaacaactgagtcagcaacatctcaccctt
aaaaacaccctaaacgagcatttattctgggtgcctaatgctgccagtatcagtaagtta
tggttaaccgaccttgaacgcagcgcggtttggctagtgcagcaagcgcagtgggatgaa
ctgggtaaagcgtgggaagagcaaaacgattattggtcttggtggatcatattgctggta
ctgtgtttagtcgtacaggacttaatcacgcctaaattcaatcgcttgcttaatcattac
accacttatgtgggcaatgtgacccaagataaatttatttataccctcaaggcactcgca
tgcagtgtcagttatgccttaataaaacctttcccagtgatcatggcgggattgattttt
tatcaatccgatcgcaactttgtgcaagcagtgggcatgggcatactggcgattggttta
gtttacctcttgtatcgcttcatctttattctgacgctcgacaaaggcgtactcgtgggc
catttcaaacgtccctcgaaactcattcaagccggacaatcacgactcagacactttgtg
ctggtcgccagtccattattgggcttgatgggctttaccgaagtgctcgacacctcactg
gtgcgcaacagcataggccgtggtgcctttattgtgttctgtatcgttttattcttgtta
tacaaagacatcttaattcttagccgtaaaaactcggatgcgaagaaagacggtaaaaac
aaaaaactcattcagaagatcctctggactttgctgatttctgtacctttgttgagtgcc
ggattagcctttaggggttactacttcaccgctttccaaatgctgttacaactgcaattg
tcgatcgtacttggtctcggtttcttgctgttataccaactgatcaaacgctggatgttg
attgaacgtcgtcgtatcgccttcgatcgcgctaaggcaaaacgtgccgaacgcttagca
caaagggaaaaaggtgaaacccatcatctctccgccgatggactcgatacctacgaagaa
cccgtggtcgatctggaaaccatttcgagccaatccctcggcctagtgcgttcgctgttg
ttattggccttcttagccagcttgattggtctgtggactcaaacccacacggcgctgttt
tccttcctcgacggcattacgctgtggacgaccaataccagcgttaatggcctagaacaa
caattgcccattaccatgaagtccttgatgtttggcctgatagtggttggtttctcgctg
atgattgccactaatctccccggcttacttgaattgatgatcctacaaagactcgatctc
tccccaggcacagggtttgcgatcacaaccgtcagccgttatctggtggtgttcttaggg
ttattaatcggcttctctaatctcgggatggaatggtctaagttacaatggctaattgct
gcactatcgctcggtttaggttttggtttacaagagattttcgccaactttatttcgggt
ctgatcattttgtttgagaaacccgtgcggattggcgacacagtgacaattcgcgattta
acagggacagtcagtaaaatccaaattcgggcgaccaccattattgactgggacagaaag
gaaatcatcatcccgaacaaggcctttatcacagagcagctgatcaactggtctttgtca
gatcctattacgcgggtcattgtttatgtgtcggtggcgcgggattctgaccccgccaaa
gtcgaagcgaccctgtaccaagcggtgcaagaatgtgaagatgcacttgccagcccagaa
cctgaagtctggtttgccggctttggtaaacacacccaagattatgaagtgcgcgcctat
gcgaaagatatgtcggcacgttggccactgcgccatgatttacataaacgagtgactaaa
aaactcaaagaaaacaatctcgaactcgcctatccgcagatggaaatccatattaagaat
ggtcaaagtcgagagcaacaaggcattattagaagctaa
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