Shewanella baltica BA175: Sbal175_3711
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Entry
Sbal175_3711 CDS
T02014
Name
(GenBank) RNA polymerase-associated protein rapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbb03021
]
Sbal175_3711
Transcription machinery [BR:
sbb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Sbal175_3711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AEG12937
LinkDB
All DBs
Position
4394124..4397030
Genome browser
AA seq
968 aa
AA seq
DB search
MPFALGQRWISDTESELGLGTVVQVEGRMVTVLFPATGENRMFSRAEAPLTRVIYNPGDS
VESHEGWSLAVSELTEKDGIVIYHGIHSETGEQITLRETLLNHNIRFNKPQDRLFAGQID
RLDRFGVRYQCQMLRHKLASSDLLGLQGPRVGLIPHQMWIAHEVGRRYAPRVLLADEVGL
GKTIEAGLIIHQQLLTGRAERILIIVPDTLRHQWLVEMLRRFNLRFSVFDEDRCVEAYAD
HDNPFYTEQLVICSLELLRKKKRLDQALDADWDLLVVDEAHHLEWTEEAPSRAYQVVEAL
SEVIPGVLLLTATPDQLGHESHFARLRLLDPDRFYDYDAFLAEEDSYKDVAIAAEALAGN
AKLPDTAINSLTELLGEKDISPSIRLIQAEGIDAEVQQAARSELLQELLDRHGTGRVLYR
NSRASVKGFPKRFFNAYPHAMPDQYQTAARVSGMMGGHKSLEAKAAQALSPEKLYQEFED
NSASWWKFDPRVDWLIEFLKSHRSKKVLIIASQAETALSLEEALRTREGIQATVFHEGMS
IIERDKAGAYFAQEEGGAQALICSEIGSEGRNFQFASHLVLFDLPLNPDLLEQRIGRLDR
IGQKNDIQIHLPYLEDTAQERLMQWYHQGLNAFELTCPSGHVLYSEFAEDLLNVLVVDDS
DELTNLLNHTQSRYKELKHAMEQGRDKLLEINSHGGEKAMAIVQRLAQNDGDTHLIGSVI
RLWDIIGVDQEDKGENSIILRPSEHMMFPTYPGLPEDGVTVTFDRDTALSRDDIALITQE
HPLVQTGLDLITGSETGTTSVAILKNKALPAGTLFLELIYMADASAPKSSQLYRYLPPTP
IRVLLDKNGNDLSAKVDYASFDKQLSAVNRHIGGKLVTASQPILHPLFAKGEEYAQVVVD
EMVAQAREKMTQQLSAELSRLESLKAVNPNIREEELEYLRNQMQELNTYLDASQLQLDAI
RMVLVSHV
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccgttcgccttaggtcaacgttggataagtgataccgagtcagagcttggtttagga
actgtggttcaagtagaaggccgtatggtcactgttttattccctgccacgggtgagaat
cgcatgttctcccgagcagaagcccctctgacacgcgttatatacaatcccggcgattcg
gttgaaagccatgaaggctggagccttgcggtcagcgagttgaccgagaaagacgggata
gtgatctatcacggcattcacagtgagacaggcgagcaaattaccctgcgtgaaaccctg
ttgaaccacaatattcgtttcaataaaccccaagaccgtttattcgccggccaaatcgat
cgcctcgaccgttttggtgtgcgttatcagtgccaaatgttgcgccacaaattggcctca
tcggatttgcttggcctgcaaggtccacgcgttggacttattccgcatcaaatgtggatt
gcccatgaagtcggtcgtcgctatgcaccgcgtgtactgctggccgacgaagtgggttta
ggtaaaaccattgaagcgggtctgattattcaccaacaactgcttactggccgcgccgaa
cgcatcctgatcatcgtgcccgatactctgcgccatcagtggttagtggaaatgctgcgc
cgctttaatctgcgcttttcggtattcgatgaagaccgttgtgtggaagcctatgccgat
cacgacaatcctttctacacagaacaattagtgatttgttcactcgaattactgcgtaag
aaaaaacgtctcgatcaagccctagatgccgattgggatctgttagtggttgacgaagct
caccacttagaatggaccgaagaagcgccaagccgcgcttatcaagtggttgaagcatta
agcgaagtgatcccaggcgttttactgttaaccgcaacgccggatcaacttggccatgaa
agtcacttcgcccgtttgcgtctgctcgatccggatcgtttctacgattacgatgccttc
ctagccgaagaagacagctataaagacgtcgctattgccgccgaagcactggctggcaac
gctaaattacccgataccgctatcaacagcttgacagagttactgggcgagaaagacatc
agcccaagtattcgtttaatccaagccgagggtattgatgctgaagtacagcaagccgcc
cgcagcgaattactgcaagaattactcgaccgtcacggtactggccgcgtcttataccgc
aacagccgcgcctcagtaaaaggcttcccaaagcgtttctttaacgcttacccacacgcc
atgccagatcaatatcaaacagccgcacgcgtcagcggcatgatgggcggacacaagtca
ttagaggcgaaagcggcgcaagccctgagccctgaaaagctgtatcaagaatttgaagat
aacagcgcaagttggtggaagtttgatccccgtgtggattggttaattgagttcttaaaa
tcacaccgcagcaaaaaagtgctgatcatcgccagccaagcggaaaccgccctgagctta
gaagaagccctgcgcacccgcgaagggattcaagcgacggtattccacgaaggcatgtcg
attatcgagcgcgataaagccggcgcttactttgcccaagaggaaggcggcgcacaggcg
ttgatctgttctgaaattggttctgaaggccgtaacttccagtttgccagtcacttagta
ctattcgatctgccgctaaacccagatctattggaacagcgcatcggtcgtttagaccgt
atcggccagaaaaatgatatccaaattcacttgccgtaccttgaagacaccgcccaagaa
cgtttgatgcagtggtatcaccaagggctaaatgccttcgaactgacttgtccgagtggc
catgtgctttacagtgaatttgccgaagatctgttaaacgtgcttgtggttgatgacagc
gacgagctgacaaacctgctcaatcacacccagagccgttataaagaactcaagcacgcc
atggagcaaggccgcgacaagctgctggaaatcaactcacacggcggcgagaaggcaatg
gctatcgtccagcgcctcgcccagaatgatggtgatacccatttgatcggttcagtgatc
cgtctgtgggatattatcggtgtcgatcaagaagataagggtgaaaactcgatcattctg
cgcccgagcgagcacatgatgttcccaacctaccctggcttgccagaagatggcgtgact
gtgaccttcgaccgtgacacagcgttatctcgcgatgatattgcgctgatcacccaagag
cacccactggtacaaacggggctagatctgatcacaggttcagaaaccggcaccaccagc
gtcgcaattctgaagaataaagccctgcctgcaggtaccttattcttagaactcatctac
atggccgatgcttctgcacctaagtcgagccagctttaccgttatttaccgcctacaccc
attcgcgtgttgttggataaaaacggtaacgacctgtcggctaaagtggattacgccagt
ttcgataagcaattgagcgcggtgaatcgtcacattggcggcaagttagtcaccgcatct
cagccaattctgcatccgttatttgctaagggtgaggaatatgctcaagtggttgtcgat
gaaatggtcgcccaagccagagagaaaatgactcagcaactgagcgcagagctgagtcgt
ttagagtcacttaaggcggtaaaccccaatatccgtgaggaagaattggaatacctgcgc
aatcagatgcaagagttaaacacttatctggatgccagccagttacaactcgatgcgatc
cgtatggtgctcgttagccacgtatag
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