Shewanella baltica BA175: Sbal175_3894
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Entry
Sbal175_3894 CDS
T02014
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb00061
Fatty acid biosynthesis
sbb00071
Fatty acid degradation
sbb01100
Metabolic pathways
sbb01212
Fatty acid metabolism
sbb02024
Quorum sensing
sbb04146
Peroxisome
Module
sbb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Sbal175_3894
00071 Fatty acid degradation
Sbal175_3894
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Sbal175_3894
09145 Cellular community - prokaryotes
02024 Quorum sensing
Sbal175_3894
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sbb01004
]
Sbal175_3894
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbb04147
]
Sbal175_3894
Enzymes [BR:
sbb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Sbal175_3894
Lipid biosynthesis proteins [BR:
sbb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Sbal175_3894
Exosome [BR:
sbb04147
]
Exosomal proteins
Exosomal proteins of breast milk
Sbal175_3894
Exosomal proteins of breast cancer cells
Sbal175_3894
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
SH3_1
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AEG13116
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All DBs
Position
4605247..4606911
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AA seq
554 aa
AA seq
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MDTAIKTPIEMLAHWAKTQGDQVYLRQPIKGQFLDFTWAEVQEKVQQLAGALQHLGLERG
DKIAVLSKNCAEWFITDLALMHGGYVSVPIYPTANTDTIRYVLQHSGAKAIFLGKLDHWA
DQEAGVGGELLRLAMPYDTMPAQYQWEQLLKLGYPLVDAPLPLPDQVMTLIYTSGSTGQP
KGAIQTFASYGWTCQAVVRDLRTDGNDRLLSYLPLAHITERVAIEGSSFYSGSVVAFVES
LDSFVADVQRAKPTVFFSVPRLWSLFQKNIIDKIGVSKLNLLLKIPLISSLVKHKIHKGL
GLNHCRLLGSGSAPIPPSLIHWYHSIGLNICEAWGMTENCAYSIINYPFDARKIGTVGRP
VEDCQIRQGEDGELLLKSPGLMTAYYLQPEATAAAFDADGFFHTGDLCSIDADGCVTITG
RVKDNFKTAKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVALVQLSEGASLQAREEV
RASLKATLDSVNPHLESHEHVDAIIVVNDPWTIENDVLTPTLKIKRHVLEKAFSERVDGI
RGAQVRWEDELTQK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggatacagcgattaagacgccaattgaaatgctggcgcactgggctaagactcagggg
gatcaagtctatttacgccaacctatcaagggtcaattccttgattttacttgggccgaa
gttcaagaaaaagtgcagcaactggccggtgccttacagcatctaggcctagagcgcggt
gataaaattgccgtactctctaaaaactgcgccgaatggtttatcaccgacctcgcgtta
atgcacggcggctatgtcagcgtgccgatttacccaacggccaacacagataccattcgc
tatgtgctgcaacacagcggtgcaaaagccattttcctcggtaaactcgaccattgggcc
gaccaagaagccggtgtcggcggcgagctgctacgcctcgctatgccctacgatacaatg
ccagcccaatatcaatgggaacaattgcttaaactaggttatccactcgtcgatgcgccg
ctgccgctgcctgatcaagtgatgacgcttatctatacctctggctcgacgggtcaacct
aagggcgcgattcaaaccttcgctagctatggctggacctgccaagcggtagtgcgtgat
ttacgcaccgacggcaatgacagactgttatcctatttgcctttagcgcacatcacagag
cgcgtcgcgattgaaggttcatccttctattccggcagcgtggtcgccttcgtcgagagt
ctcgactccttcgtcgccgacgtgcaaagggcaaaaccgacggtattcttctcagtgccg
cgtttgtggagcctgttccagaaaaacatcatagacaaaattggtgttagtaaactgaat
ctattgctgaagatcccgttaatcagcagcttagtgaagcacaaaatccataaaggctta
ggtttgaaccattgtcgtttgctcggctctggctctgcgcccattccgccgtcgctgatc
cactggtatcacagcattggtctgaatatctgtgaagcttggggtatgacagaaaactgc
gcctactcgattatcaactaccccttcgatgcccgtaaaattggcacagtaggtcgcccg
gttgaggattgtcagatccgccaaggggaagatggtgagctactgcttaagagtccaggg
ttgatgacggcttattatctacagcccgaagccactgctgcagccttcgacgccgatggt
ttcttccacactggcgatttatgctctattgatgccgatggttgcgtgaccattactggc
cgagtgaaggacaacttcaaaacagccaagggaaaatatgtcgcgcccgtgcctatcgaa
cgtaaattagcgcaggacccgcatgttgaactgatctgcgtgattggctctggcctgccg
catccggtcgcattagtccaattatccgaaggcgctagtttgcaagcccgcgaagaagtc
cgcgcttcactcaaggcgacacttgatagcgtgaatccgcacttagagtcacacgaacat
gtggatgcgattatcgtagttaacgacccttggacgattgagaacgatgtactgacaccg
acgcttaagatcaaacgccatgtgcttgaaaaagcctttagcgaacgagttgatggcatt
cgtggcgcccaagttcgctgggaagatgagttaacgcaaaaataa
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