Shewanella baltica BA175: Sbal175_4274
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Entry
Sbal175_4274 CDS
T02014
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03030
DNA replication
sbb03410
Base excision repair
sbb03420
Nucleotide excision repair
sbb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Sbal175_4274
03410 Base excision repair
Sbal175_4274
03420 Nucleotide excision repair
Sbal175_4274
03440 Homologous recombination
Sbal175_4274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbb03032
]
Sbal175_4274
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_4274
Enzymes [BR:
sbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Sbal175_4274
DNA replication proteins [BR:
sbb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Sbal175_4274
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Sbal175_4274
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sbal175_4274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Prok-E2_E
Motif
Other DBs
NCBI-ProteinID:
AEG13491
LinkDB
All DBs
Position
5016401..5019166
Genome browser
AA seq
921 aa
AA seq
DB search
MPTVAKNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLTRYQPSHIAV
VFDAKGKTFRNDMYSEYKAQRPPMPDDLRSQIEPLHRIIRALGLPLISISGVEADDVIGT
IARQASLENRAVLISTGDKDMAQLVDENVTLINTMTDTIMGPEEVAIKFGVGPDRIIDLL
ALMGDKADNIPGLPGVGEKTALAMLTGAGSVSNLLAEPEKVAELGFRGSKTMAAKIIENA
DMLKLSYELATIKTDVELEQDWHELTIKPADKDELIKCYGEMEFKRWLAEVLDNKITANT
SIDAASETQEDSTPVEAIATQYDCILTEAELDAWIAKLKQADLMAVDTETTSLDYMVAEL
VGISFAVEAGKAAYLPLTHDYVGAPTQIDKTVALEKLRPLLEDPKLKKVGQNLKYDISIL
ANAGIKLQGVAFDTMLESYVFNSVASRHDMDGLALKYLGHKNISFEEIAGKGAKQLTFNQ
IPLETAAPYAAEDADITLRLHQHLWPRLEKEAELAAMFIEVELPLIQVLSDIERQGVLID
SMLLGQQSDELARKIDTLEEKAYDIAGEKFNLGSPKQLQVLFFEKLGYPITKKTPKGAPS
TAEEVLVELALDFPLPKVILEHRSLSKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATGR
LSSSEPNLQNIPIRTEEGRRIRQAFIAPDGRKILAADYSQIELRIMAHLSQDAGLLKAFA
EGKDIHRATAAEVFGTDFDEVTTEQRRRAKAVNFGLIYGMSAFGLARQLDIPRHEAQTYI
DTYFARYPGVLRYMEETRAGAADLGYVSTLFGRRLYLPEIRDRNAMRRQGAERAAINAPM
QGTAADIIKKAMINIAQWIKTETQGEITMIMQVHDELVFEVDADKAEALKKTICTLMAQA
ADLDVELLAEAGIGNNWDEAH
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccgtcgctaaaaacccacttgtgcttgtggatggatcttcctatttatatcgc
gcttattatgcgcctcctcacctgacaaactcaaagggcgaagcaaccggtgccgtttat
ggcgtagtgaatatgttacgcagcttgctgactcgctatcagccgagccatatcgcagtc
gtgttcgatgccaagggcaaaaccttccgcaatgacatgtacagcgagtacaaagcacag
cgcccacctatgcctgatgacctacgttcgcaaatcgaacctttacaccgcattattcgt
gcactgggtttaccactgatttcgatttccggcgtcgaagccgatgacgtgatcggcact
attgctcgccaagccagtttagaaaaccgtgcagtgcttatcagcactggcgataaagac
atggcgcagttagtcgatgagaacgtcacgctcatcaacaccatgacagacaccataatg
ggcccagaagaagtcgcgattaaatttggtgttggtccagaccgtatcatagatttgctc
gcgctgatgggcgacaaggccgacaacattcccggcttacccggcgttggtgagaaaaca
gcgctcgctatgctcacaggagccggcagcgtgagtaacttattagctgaacccgaaaaa
gtcgccgagctcggctttagaggttctaaaaccatggcggcgaagatcattgaaaatgcc
gacatgctcaagctttcttacgaactcgccaccatcaaaaccgatgtcgaacttgagcaa
gactggcacgaactcaccatcaagcccgcggacaaagatgaactgatcaaatgctacggc
gagatggaatttaagcgttggttagccgaagtcttagataacaaaatcactgcaaatacc
tcaattgatgcggcatccgagacacaagaagactcaactccagtcgaagcgattgcaacg
cagtacgactgcattctcacggaagccgaattagacgcttggattgctaagcttaagcaa
gccgacttgatggcggtagataccgagaccaccagcttagattacatggtggctgaatta
gtcgggatctccttcgccgttgaggcaggaaaagcggcttatctgcctttgacccatgat
tatgttggcgcaccgactcaaatcgataaaaccgtcgcgctagaaaaactgcgtccactg
cttgaagatccaaaacttaagaaagtcggtcaaaatcttaagtacgacatcagtatctta
gccaatgcgggtatcaaactgcagggcgtcgctttcgacactatgctcgaatcctatgtc
ttcaactcagtagcttcgcgccatgatatggatggcttagcactcaagtacttaggccat
aaaaatatcagcttcgaagaaatcgccggcaaaggtgcaaaacagctgaccttcaaccaa
attccactggaaacggctgcgccttatgcggccgaagatgccgacatcaccctgcgtttg
caccaacatttgtggccaagactcgaaaaagaagcggaactggccgctatgtttatcgaa
gtcgaattgccgctcatccaagtattgtcggatattgaacgccaaggggtattaatcgat
agcatgttactcggccaacaaagcgacgagctggcgcgtaaaatcgataccttggaagag
aaagcctacgacattgccggtgagaaatttaaccttggctcgcctaagcaactgcaagta
ttgttttttgaaaagctcggttacccgatcaccaaaaagacccccaagggcgcgccatcg
accgcggaagaagtgttggtcgaattggcattagatttccctctgccaaaggtgatcctc
gaacatcgcagcctatctaaattaaagagcacttacacagataaactgccactaatggtc
aacgctaaaacgggtcgtgtgcacactagctatcatcaggccaatgcggcaacaggacgc
ttatcatcgagcgaacctaatctgcagaatattcctatccgcaccgaagaaggtcgccgt
attcgccaagcctttatcgcacctgatggtcgtaaaattttggcagccgactactcgcaa
atcgaactacggatcatggcgcatttatcccaagatgctggcttactcaaagccttcgcc
gagggcaaagacattcacagagctacggctgccgaagtgtttggcactgactttgatgaa
gtaaccacagaacagcgtcgccgcgccaaagcggttaacttcggcttaatttacggcatg
tcagcctttggtttagcgcgtcagctcgatatcccgcgccatgaagcacaaacctatatc
gacacctactttgcccgttatccaggcgtattacgttatatggaagagacgcgtgcgggg
gctgccgacctaggttatgtatcgactctgtttggtcgtcgcctctacttgcccgaaatc
cgtgatcgtaacgcgatgcgccgccaaggtgctgaacgtgctgcgattaatgccccaatg
caaggcacggctgccgacatcatcaaaaaggccatgatcaatatcgcccagtggataaag
acagaaacccaaggcgaaatcactatgatcatgcaggttcacgatgaattggtgtttgaa
gtcgatgcggataaagcagaagcgcttaaaaagacaatctgcactttaatggcacaagcc
gccgatctcgatgttgaactacttgccgaagcgggcattggtaataactgggatgaagcc
cactaa
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