Shewanella baltica BA175: Sbal175_4390
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Entry
Sbal175_4390 CDS
T02014
Name
(GenBank) histone family protein nucleoid-structuring protein H-NS
KO
K03746
DNA-binding protein H-NS
Organism
sbb
Shewanella baltica BA175
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbb03036
]
Sbal175_4390
03400 DNA repair and recombination proteins [BR:
sbb03400
]
Sbal175_4390
Chromosome and associated proteins [BR:
sbb03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
Sbal175_4390
DNA repair and recombination proteins [BR:
sbb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sbal175_4390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
Seryl_tRNA_N
DUF6685
Motif
Other DBs
NCBI-ProteinID:
AEG13601
LinkDB
All DBs
Position
pSBAL17502:complement(9534..9932)
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AA seq
132 aa
AA seq
DB search
MTDFISTLTHARKFKAAVSTLALTELHSFQEKLLALIDTREKEEAEAVNLNAERNAQLNE
IKRKMLELGLSAEDLNHVTMPKKKREPRPAKYQIEVDGEMLTWTGQGRMPTELKKEIDEG
FELSDFLIVQKN
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atgacggactttatcagcacgttaactcacgcccgtaaattcaaagccgccgtatcaaca
ttagcattaactgaactgcactcatttcaagagaagctactcgcattaatcgacacgaga
gaaaaagaagaagcagaggccgttaatcttaacgctgaacgtaacgcacagctcaatgag
attaagcgcaagatgctcgaactcggattaagtgcagaagacctaaatcacgttacaatg
ccgaagaaaaagcgtgaacctcgccctgcaaaatatcagattgaagttgatggggaaatg
ctgacttggacaggccaaggccgtatgccgacagagttaaaaaaagagatcgatgaaggt
tttgaattaagcgatttccttatcgtccaaaaaaattaa
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