Shigella boydii CDC 3083-94 (serotype 18): SbBS512_A0048
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Entry
SbBS512_A0048 CDS
T00700
Name
(GenBank) IS100 transposase orfA
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_7
HTH_38
HTH_23
TnsD
Sigma70_r4_2
HTH_31
HTH_24
HTH_29
GerE
HTH_IclR
HTH_3
HTH_26
HTH_11
DNA_pol3_delta_C
HTH_28
YdaS_toxin
HTH_40
Terminase_5
HTH_35
HTH_20
GcrA
HTH_Tnp_ISL3
Phage_NinH
HTH_AsnC-type
RepB
CENP-B_N
HTH_50
HTH_36
MerR-DNA-bind
rve_3
HTH_30
Sigma70_r4
NUMOD1
Crp
Motif
Other DBs
NCBI-ProteinID:
ACD06281
UniProt:
B2TSP3
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All DBs
Position
pBS512_211:28147..29169
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AA seq
340 aa
AA seq
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MVTFETVMEIKILHKQGMSSRAIARELGLSRNTVKRYLQAKSEPPKYTPRPAVASLLDEY
RDYIRQRIADAHPYKIPATVIAREIRDQGYRGGMTILRAFIRSLSVPQEQEPAVRFETEP
GRQMQVDWGTMRNGRSPLHVFVAVPGYSRMLYIEFTDNMRYDTLETCHRNAFRFFGGVPR
EVLYDNMKTVVLQRDAYQTGQHRFHPSLWQFGKEMGFSPRLCRPFRAQTKGKVERMVQYT
RNSFYIPLMTRLRPMGSTVDVETANRHGLRWLHDVANQRKHETIQARPCDRWLEEQQSML
ALPPEKKEYDVHPGENLVSFDNPPQHHPLSIYDSFCRGVA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggtcacttttgagacagttatggaaattaaaatcctgcacaagcagggaatgagtagc
cgggcgattgccagagaactggggctctcccgcaataccgttaaacgttatttgcaggca
aaatctgagccgccaaaatatacgccgcgacctgctgttgcttcactcctggatgaatac
cgggattatattcgtcaacgcatcgccgatgctcatccttacaaaatcccggcaacggta
atcgctcgcgagatcagagaccagggatatcgtggcggaatgaccattctcagggcattc
attcgttctctctcggttcctcaggagcaggagcctgccgttcggttcgaaactgaaccc
ggacgacagatgcaggttgactggggcactatgcgtaatggtcgctcaccgcttcacgtg
ttcgttgctgttcccggatacagtcgaatgttgtacatcgaattcactgacaatatgcgt
tatgacacgctggagacctgccatcgtaatgcgttccgcttctttggtggtgtgccgcgc
gaagtgttgtatgacaatatgaaaactgtggttctgcaacgtgacgcatatcagaccggt
cagcaccggttccatccttcgctgtggcagttcggcaaggagatgggcttctctccccga
ctgtgtcgccccttcagggcacagactaaaggtaaggtggaacggatggtgcagtacacc
cgtaacagtttttacatcccactaatgactcgcctgcgcccgatggggagcactgtcgat
gttgaaacagccaaccgccacggtctgcgctggctgcacgatgtcgctaaccaacgaaag
catgaaacaatccaggcccgtccctgtgatcgctggctcgaagagcagcagtccatgctg
gcactgcctccggagaaaaaagagtatgacgtgcatcctggtgaaaatctggtgagcttc
gacaaccccccccagcatcatccactctccatctacgactcattctgcagaggagtggcg
tga
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